494 related articles for article (PubMed ID: 18178591)
1. Model-based variance-stabilizing transformation for Illumina microarray data.
Lin SM; Du P; Huber W; Kibbe WA
Nucleic Acids Res; 2008 Feb; 36(2):e11. PubMed ID: 18178591
[TBL] [Abstract][Full Text] [Related]
2. lumi: a pipeline for processing Illumina microarray.
Du P; Kibbe WA; Lin SM
Bioinformatics; 2008 Jul; 24(13):1547-8. PubMed ID: 18467348
[TBL] [Abstract][Full Text] [Related]
3. Gene filtering in the analysis of Illumina microarray experiments.
Forcheh AC; Verbeke G; Kasim A; Lin D; Shkedy Z; Talloen W; Göhlmann HW; Clement L
Stat Appl Genet Mol Biol; 2012 Jan; 11(2):. PubMed ID: 22499694
[TBL] [Abstract][Full Text] [Related]
4. Variance stabilization and normalization for one-color microarray data using a data-driven multiscale approach.
Motakis ES; Nason GP; Fryzlewicz P; Rutter GA
Bioinformatics; 2006 Oct; 22(20):2547-53. PubMed ID: 16877753
[TBL] [Abstract][Full Text] [Related]
5. A variance-stabilizing transformation for gene-expression microarray data.
Durbin BP; Hardin JS; Hawkins DM; Rocke DM
Bioinformatics; 2002; 18 Suppl 1():S105-10. PubMed ID: 12169537
[TBL] [Abstract][Full Text] [Related]
6. Spike-in validation of an Illumina-specific variance-stabilizing transformation.
Dunning MJ; Ritchie ME; Barbosa-Morais NL; Tavaré S; Lynch AG
BMC Res Notes; 2008 Jun; 1():18. PubMed ID: 18710543
[TBL] [Abstract][Full Text] [Related]
7. Variance stabilization applied to microarray data calibration and to the quantification of differential expression.
Huber W; von Heydebreck A; Sültmann H; Poustka A; Vingron M
Bioinformatics; 2002; 18 Suppl 1():S96-104. PubMed ID: 12169536
[TBL] [Abstract][Full Text] [Related]
8. Transformation and normalization of oligonucleotide microarray data.
Geller SC; Gregg JP; Hagerman P; Rocke DM
Bioinformatics; 2003 Sep; 19(14):1817-23. PubMed ID: 14512353
[TBL] [Abstract][Full Text] [Related]
9. Variance-stabilizing transformations for two-color microarrays.
Durbin BP; Rocke DM
Bioinformatics; 2004 Mar; 20(5):660-7. PubMed ID: 15033873
[TBL] [Abstract][Full Text] [Related]
10. Rosetta error model for gene expression analysis.
Weng L; Dai H; Zhan Y; He Y; Stepaniants SB; Bassett DE
Bioinformatics; 2006 May; 22(9):1111-21. PubMed ID: 16522673
[TBL] [Abstract][Full Text] [Related]
11. EVE (external variance estimation) increases statistical power for detecting differentially expressed genes.
Wille A; Gruissem W; Bühlmann P; Hennig L
Plant J; 2007 Nov; 52(3):561-9. PubMed ID: 17680783
[TBL] [Abstract][Full Text] [Related]
12. Graphical technique for identifying a monotonic variance stabilizing transformation for absolute gene intensity signals.
Archer KJ; Dumur CI; Ramakrishnan V
BMC Bioinformatics; 2004 May; 5():60. PubMed ID: 15147579
[TBL] [Abstract][Full Text] [Related]
13. Analysis of variance components in gene expression data.
Chen JJ; Delongchamp RR; Tsai CA; Hsueh HM; Sistare F; Thompson KL; Desai VG; Fuscoe JC
Bioinformatics; 2004 Jun; 20(9):1436-46. PubMed ID: 14962916
[TBL] [Abstract][Full Text] [Related]
14. Preprocessing of gene expression data by optimally robust estimators.
Kohl M; Deigner HP
BMC Bioinformatics; 2010 Nov; 11():583. PubMed ID: 21118506
[TBL] [Abstract][Full Text] [Related]
15. Empirical array quality weights in the analysis of microarray data.
Ritchie ME; Diyagama D; Neilson J; van Laar R; Dobrovic A; Holloway A; Smyth GK
BMC Bioinformatics; 2006 May; 7():261. PubMed ID: 16712727
[TBL] [Abstract][Full Text] [Related]
16. Improved parameter estimation for variance-stabilizing transformation of gene-expression microarray data.
Inoue M; Nishimura S; Hori G; Nakahara H; Saito M; Yoshihara Y; Amari S
J Bioinform Comput Biol; 2004 Dec; 2(4):669-79. PubMed ID: 15617160
[TBL] [Abstract][Full Text] [Related]
17. Leveraging two-way probe-level block design for identifying differential gene expression with high-density oligonucleotide arrays.
Barrera L; Benner C; Tao YC; Winzeler E; Zhou Y
BMC Bioinformatics; 2004 Apr; 5():42. PubMed ID: 15099405
[TBL] [Abstract][Full Text] [Related]
18. SScore: an R package for detecting differential gene expression without gene expression summaries.
Kennedy RE; Kerns RT; Kong X; Archer KJ; Miles MF
Bioinformatics; 2006 May; 22(10):1272-4. PubMed ID: 16574698
[TBL] [Abstract][Full Text] [Related]
19. High-resolution spatial normalization for microarrays containing embedded technical replicates.
Yuan DS; Irizarry RA
Bioinformatics; 2006 Dec; 22(24):3054-60. PubMed ID: 17060357
[TBL] [Abstract][Full Text] [Related]
20. Replication, variation and normalisation in microarray experiments.
Altman N
Appl Bioinformatics; 2005; 4(1):33-44. PubMed ID: 16000011
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
