250 related articles for article (PubMed ID: 18189369)
1. Label-free comparative analysis of proteomics mixtures using chromatographic alignment of high-resolution muLC-MS data.
Finney GL; Blackler AR; Hoopmann MR; Canterbury JD; Wu CC; MacCoss MJ
Anal Chem; 2008 Feb; 80(4):961-71. PubMed ID: 18189369
[TBL] [Abstract][Full Text] [Related]
2. Differential mass spectrometry: a label-free LC-MS method for finding significant differences in complex peptide and protein mixtures.
Wiener MC; Sachs JR; Deyanova EG; Yates NA
Anal Chem; 2004 Oct; 76(20):6085-96. PubMed ID: 15481957
[TBL] [Abstract][Full Text] [Related]
3. Global quantitative proteomic profiling through 18O-labeling in combination with MS/MS spectra analysis.
White CA; Oey N; Emili A
J Proteome Res; 2009 Jul; 8(7):3653-65. PubMed ID: 19400582
[TBL] [Abstract][Full Text] [Related]
4. Automated 20 kpsi RPLC-MS and MS/MS with chromatographic peak capacities of 1000-1500 and capabilities in proteomics and metabolomics.
Shen Y; Zhang R; Moore RJ; Kim J; Metz TO; Hixson KK; Zhao R; Livesay EA; Udseth HR; Smith RD
Anal Chem; 2005 May; 77(10):3090-100. PubMed ID: 15889897
[TBL] [Abstract][Full Text] [Related]
5. Quantitative peptide and protein profiling by mass spectrometry.
Schmidt A; Bisle B; Kislinger T
Methods Mol Biol; 2009; 492():21-38. PubMed ID: 19241025
[TBL] [Abstract][Full Text] [Related]
6. MassUntangler: a novel alignment tool for label-free liquid chromatography-mass spectrometry proteomic data.
Ballardini R; Benevento M; Arrigoni G; Pattini L; Roda A
J Chromatogr A; 2011 Dec; 1218(49):8859-68. PubMed ID: 21783198
[TBL] [Abstract][Full Text] [Related]
7. A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS.
Bellew M; Coram M; Fitzgibbon M; Igra M; Randolph T; Wang P; May D; Eng J; Fang R; Lin C; Chen J; Goodlett D; Whiteaker J; Paulovich A; McIntosh M
Bioinformatics; 2006 Aug; 22(15):1902-9. PubMed ID: 16766559
[TBL] [Abstract][Full Text] [Related]
8. Quantitative protein profiling by mass spectrometry using label-free proteomics.
Haqqani AS; Kelly JF; Stanimirovic DB
Methods Mol Biol; 2008; 439():241-56. PubMed ID: 18370108
[TBL] [Abstract][Full Text] [Related]
9. SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling.
Mueller LN; Rinner O; Schmidt A; Letarte S; Bodenmiller B; Brusniak MY; Vitek O; Aebersold R; Müller M
Proteomics; 2007 Oct; 7(19):3470-80. PubMed ID: 17726677
[TBL] [Abstract][Full Text] [Related]
10. An iterative strategy for precursor ion selection for LC-MS/MS based shotgun proteomics.
Zerck A; Nordhoff E; Resemann A; Mirgorodskaya E; Suckau D; Reinert K; Lehrach H; Gobom J
J Proteome Res; 2009 Jul; 8(7):3239-51. PubMed ID: 19402737
[TBL] [Abstract][Full Text] [Related]
11. Label-free detection of differential protein expression by LC/MALDI mass spectrometry.
Neubert H; Bonnert TP; Rumpel K; Hunt BT; Henle ES; James IT
J Proteome Res; 2008 Jun; 7(6):2270-9. PubMed ID: 18412385
[TBL] [Abstract][Full Text] [Related]
12. Computational methods for the comparative quantification of proteins in label-free LCn-MS experiments.
Wong JW; Sullivan MJ; Cagney G
Brief Bioinform; 2008 Mar; 9(2):156-65. PubMed ID: 17905794
[TBL] [Abstract][Full Text] [Related]
13. Data pre-processing in liquid chromatography-mass spectrometry-based proteomics.
Zhang X; Asara JM; Adamec J; Ouzzani M; Elmagarmid AK
Bioinformatics; 2005 Nov; 21(21):4054-9. PubMed ID: 16150809
[TBL] [Abstract][Full Text] [Related]
14. Robust algorithm for alignment of liquid chromatography-mass spectrometry analyses in an accurate mass and time tag data analysis pipeline.
Jaitly N; Monroe ME; Petyuk VA; Clauss TR; Adkins JN; Smith RD
Anal Chem; 2006 Nov; 78(21):7397-409. PubMed ID: 17073405
[TBL] [Abstract][Full Text] [Related]
15. An alternative sampling algorithm for use in liquid chromatography/tandem mass spectrometry experiments.
Kohli BM; Eng JK; Nitsch RM; Konietzko U
Rapid Commun Mass Spectrom; 2005; 19(5):589-96. PubMed ID: 15685682
[TBL] [Abstract][Full Text] [Related]
16. Detecting differential and correlated protein expression in label-free shotgun proteomics.
Zhang B; VerBerkmoes NC; Langston MA; Uberbacher E; Hettich RL; Samatova NF
J Proteome Res; 2006 Nov; 5(11):2909-18. PubMed ID: 17081042
[TBL] [Abstract][Full Text] [Related]
17. Mass measurement accuracy in analyses of highly complex mixtures based upon multidimensional recalibration.
Tolmachev AV; Monroe ME; Jaitly N; Petyuk VA; Adkins JN; Smith RD
Anal Chem; 2006 Dec; 78(24):8374-85. PubMed ID: 17165830
[TBL] [Abstract][Full Text] [Related]
18. MapQuant: open-source software for large-scale protein quantification.
Leptos KC; Sarracino DA; Jaffe JD; Krastins B; Church GM
Proteomics; 2006 Mar; 6(6):1770-82. PubMed ID: 16470651
[TBL] [Abstract][Full Text] [Related]
19. Semi-supervised LC/MS alignment for differential proteomics.
Fischer B; Grossmann J; Roth V; Gruissem W; Baginsky S; Buhmann JM
Bioinformatics; 2006 Jul; 22(14):e132-40. PubMed ID: 16873463
[TBL] [Abstract][Full Text] [Related]
20. Quantitative protein analysis by solid phase isotope tagging and mass spectrometry.
Zhou H; Boyle R; Aebersold R
Methods Mol Biol; 2004; 261():511-8. PubMed ID: 15064479
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
