BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

201 related articles for article (PubMed ID: 18307761)

  • 1. Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes.
    Bohlin J; Skjerve E; Ussery DW
    BMC Genomics; 2008 Feb; 9():104. PubMed ID: 18307761
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Examination of genome homogeneity in prokaryotes using genomic signatures.
    Bohlin J; Skjerve E
    PLoS One; 2009 Dec; 4(12):e8113. PubMed ID: 19956556
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Investigations of oligonucleotide usage variance within and between prokaryotes.
    Bohlin J; Skjerve E; Ussery DW
    PLoS Comput Biol; 2008 Apr; 4(4):e1000057. PubMed ID: 18421372
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The mystery of two straight lines in bacterial genome statistics.
    Gorban AN; Zinovyev AY
    Bull Math Biol; 2007 Oct; 69(7):2429-42. PubMed ID: 17577600
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A large-scale evaluation of algorithms to calculate average nucleotide identity.
    Yoon SH; Ha SM; Lim J; Kwon S; Chun J
    Antonie Van Leeuwenhoek; 2017 Oct; 110(10):1281-1286. PubMed ID: 28204908
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Environmental genomics of "Haloquadratum walsbyi" in a saltern crystallizer indicates a large pool of accessory genes in an otherwise coherent species.
    Legault BA; Lopez-Lopez A; Alba-Casado JC; Doolittle WF; Bolhuis H; Rodriguez-Valera F; Papke RT
    BMC Genomics; 2006 Jul; 7():171. PubMed ID: 16820057
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PSAT: a web tool to compare genomic neighborhoods of multiple prokaryotic genomes.
    Fong C; Rohmer L; Radey M; Wasnick M; Brittnacher MJ
    BMC Bioinformatics; 2008 Mar; 9():170. PubMed ID: 18366802
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Seven GC-rich microbial genomes adopt similar codon usage patterns regardless of their phylogenetic lineages.
    Chen LL; Zhang CT
    Biochem Biophys Res Commun; 2003 Jun; 306(1):310-7. PubMed ID: 12788106
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Analysis of the relationship between genomic GC Content and patterns of base usage, codon usage and amino acid usage in prokaryotes: similar GC content adopts similar compositional frequencies regardless of the phylogenetic lineages.
    Zhou HQ; Ning LW; Zhang HX; Guo FB
    PLoS One; 2014; 9(9):e107319. PubMed ID: 25255224
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Tetranucleotide frequencies in microbial genomes.
    Noble PA; Citek RW; Ogunseitan OA
    Electrophoresis; 1998 Apr; 19(4):528-35. PubMed ID: 9588798
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A close relationship between primary nucleotides sequence structure and the composition of functional genes in the genome of prokaryotes.
    Garcia JA; Fernández-Guerra A; Casamayor EO
    Mol Phylogenet Evol; 2011 Dec; 61(3):650-8. PubMed ID: 21864693
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Determination of bias in the relative abundance of oligonucleotides in DNA sequences.
    Elhai J
    J Comput Biol; 2001; 8(2):151-75. PubMed ID: 11454303
    [TBL] [Abstract][Full Text] [Related]  

  • 13. OASIS: an automated program for global investigation of bacterial and archaeal insertion sequences.
    Robinson DG; Lee MC; Marx CJ
    Nucleic Acids Res; 2012 Dec; 40(22):e174. PubMed ID: 22904081
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Gene-centric association analysis for the correlation between the guanine-cytosine content levels and temperature range conditions of prokaryotic species.
    Zheng H; Wu H
    BMC Bioinformatics; 2010 Dec; 11 Suppl 11(Suppl 11):S7. PubMed ID: 21172057
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Archaeal histone selection of nucleosome positioning sequences and the procaryotic origin of histone-dependent genome evolution.
    Bailey KA; Pereira SL; Widom J; Reeve JN
    J Mol Biol; 2000 Oct; 303(1):25-34. PubMed ID: 11021967
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genome trees constructed using five different approaches suggest new major bacterial clades.
    Wolf YI; Rogozin IB; Grishin NV; Tatusov RL; Koonin EV
    BMC Evol Biol; 2001 Oct; 1():8. PubMed ID: 11734060
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Bioinformatic genome comparisons for taxonomic and phylogenetic assignments using Aeromonas as a test case.
    Colston SM; Fullmer MS; Beka L; Lamy B; Gogarten JP; Graf J
    mBio; 2014 Nov; 5(6):e02136. PubMed ID: 25406383
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A quantitative account of genomic island acquisitions in prokaryotes.
    Roos TE; van Passel MW
    BMC Genomics; 2011 Aug; 12():427. PubMed ID: 21864345
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context.
    Wolf YI; Rogozin IB; Kondrashov AS; Koonin EV
    Genome Res; 2001 Mar; 11(3):356-72. PubMed ID: 11230160
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Low-pass sequencing for microbial comparative genomics.
    Goo YA; Roach J; Glusman G; Baliga NS; Deutsch K; Pan M; Kennedy S; DasSarma S; Ng WV; Hood L
    BMC Genomics; 2004 Jan; 5(1):3. PubMed ID: 14718067
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.