405 related articles for article (PubMed ID: 18333883)
1. Prevalence of RNA polymerase stalling at Escherichia coli promoters after open complex formation.
Hatoum A; Roberts J
Mol Microbiol; 2008 Apr; 68(1):17-28. PubMed ID: 18333883
[TBL] [Abstract][Full Text] [Related]
2. Early transcriptional arrest at Escherichia coli rplN and ompX promoters.
Stepanova E; Wang M; Severinov K; Borukhov S
J Biol Chem; 2009 Dec; 284(51):35702-13. PubMed ID: 19854830
[TBL] [Abstract][Full Text] [Related]
3. Role of Interactions of the CRE Region of Escherichia coli RNA Polymerase with Nontemplate DNA during Promoter Escape.
Petushkov IV; Kulbachinskiy AV
Biochemistry (Mosc); 2020 Jul; 85(7):792-800. PubMed ID: 33040723
[TBL] [Abstract][Full Text] [Related]
4. Coupling of downstream RNA polymerase-promoter interactions with formation of catalytically competent transcription initiation complex.
Mekler V; Minakhin L; Borukhov S; Mustaev A; Severinov K
J Mol Biol; 2014 Dec; 426(24):3973-3984. PubMed ID: 25311862
[TBL] [Abstract][Full Text] [Related]
5. Σ(70)-dependent transcription pausing in Escherichia coli.
Perdue SA; Roberts JW
J Mol Biol; 2011 Oct; 412(5):782-92. PubMed ID: 21316374
[TBL] [Abstract][Full Text] [Related]
6. Post-initiation control by the initiation factor sigma.
Artsimovitch I
Mol Microbiol; 2008 Apr; 68(1):1-3. PubMed ID: 18312277
[TBL] [Abstract][Full Text] [Related]
7. Interplay between σ region 3.2 and secondary channel factors during promoter escape by bacterial RNA polymerase.
Petushkov I; Esyunina D; Mekler V; Severinov K; Pupov D; Kulbachinskiy A
Biochem J; 2017 Dec; 474(24):4053-4064. PubMed ID: 29101286
[TBL] [Abstract][Full Text] [Related]
8. Region 3.2 of the σ factor controls the stability of rRNA promoter complexes and potentiates their repression by DksA.
Pupov D; Petushkov I; Esyunina D; Murakami KS; Kulbachinskiy A
Nucleic Acids Res; 2018 Nov; 46(21):11477-11487. PubMed ID: 30321408
[TBL] [Abstract][Full Text] [Related]
9. Aromatic amino acids in region 2.3 of Escherichia coli sigma 70 participate collectively in the formation of an RNA polymerase-promoter open complex.
Panaghie G; Aiyar SE; Bobb KL; Hayward RS; de Haseth PL
J Mol Biol; 2000 Jun; 299(5):1217-30. PubMed ID: 10873447
[TBL] [Abstract][Full Text] [Related]
10. Domain 1.1 of the sigma(70) subunit of Escherichia coli RNA polymerase modulates the formation of stable polymerase/promoter complexes.
Vuthoori S; Bowers CW; McCracken A; Dombroski AJ; Hinton DM
J Mol Biol; 2001 Jun; 309(3):561-72. PubMed ID: 11397080
[TBL] [Abstract][Full Text] [Related]
11. The bacterial DNA-binding protein H-NS represses ribosomal RNA transcription by trapping RNA polymerase in the initiation complex.
Schröder O; Wagner R
J Mol Biol; 2000 May; 298(5):737-48. PubMed ID: 10801345
[TBL] [Abstract][Full Text] [Related]
12. Cryo-EM structure of
Narayanan A; Vago FS; Li K; Qayyum MZ; Yernool D; Jiang W; Murakami KS
J Biol Chem; 2018 May; 293(19):7367-7375. PubMed ID: 29581236
[TBL] [Abstract][Full Text] [Related]
13. Universal functions of the σ finger in alternative σ factors during transcription initiation by bacterial RNA polymerase.
Oguienko A; Petushkov I; Pupov D; Esyunina D; Kulbachinskiy A
RNA Biol; 2021 Nov; 18(11):2028-2037. PubMed ID: 33573428
[TBL] [Abstract][Full Text] [Related]
14. Mutations in RNA Polymerase Bridge Helix and Switch Regions Affect Active-Site Networks and Transcript-Assisted Hydrolysis.
Zhang N; Schäfer J; Sharma A; Rayner L; Zhang X; Tuma R; Stockley P; Buck M
J Mol Biol; 2015 Nov; 427(22):3516-3526. PubMed ID: 26365052
[TBL] [Abstract][Full Text] [Related]
15. A backtrack-inducing sequence is an essential component of Escherichia coli σ(70)-dependent promoter-proximal pausing.
Perdue SA; Roberts JW
Mol Microbiol; 2010 Nov; 78(3):636-50. PubMed ID: 21382107
[TBL] [Abstract][Full Text] [Related]
16. Metalloregulator CueR biases RNA polymerase's kinetic sampling of dead-end or open complex to repress or activate transcription.
Martell DJ; Joshi CP; Gaballa A; Santiago AG; Chen TY; Jung W; Helmann JD; Chen P
Proc Natl Acad Sci U S A; 2015 Nov; 112(44):13467-72. PubMed ID: 26483469
[TBL] [Abstract][Full Text] [Related]
17. Fine structure of the promoter-sigma region 1.2 interaction.
Haugen SP; Ross W; Manrique M; Gourse RL
Proc Natl Acad Sci U S A; 2008 Mar; 105(9):3292-7. PubMed ID: 18287032
[TBL] [Abstract][Full Text] [Related]
18. Protein-protein interactions between sigma(70) region 4 of RNA polymerase and Escherichia coli SoxS, a transcription activator that functions by the prerecruitment mechanism: evidence for "off-DNA" and "on-DNA" interactions.
Zafar MA; Shah IM; Wolf RE
J Mol Biol; 2010 Aug; 401(1):13-32. PubMed ID: 20595001
[TBL] [Abstract][Full Text] [Related]
19. Effect of heparin and heparan sulphate on open promoter complex formation for a simple tandem gene model using ex situ atomic force microscopy.
Chammas O; Bonass WA; Thomson NH
Methods; 2017 May; 120():91-102. PubMed ID: 28434996
[TBL] [Abstract][Full Text] [Related]
20. Multiple roles of the RNA polymerase beta subunit flap domain in sigma 54-dependent transcription.
Wigneshweraraj SR; Kuznedelov K; Severinov K; Buck M
J Biol Chem; 2003 Jan; 278(5):3455-65. PubMed ID: 12424241
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
