109 related articles for article (PubMed ID: 18343410)
1. Dynamics of sialyl Lewis(a) in aqueous solution and prediction of the structure of the sialyl Lewis(a)-SelectinE complex.
Veluraja K; Seethalakshmi AN
J Theor Biol; 2008 May; 252(1):15-23. PubMed ID: 18343410
[TBL] [Abstract][Full Text] [Related]
2. Conformational dynamics of sialyl Lewisx in aqueous solution and its interaction with selectinE. A study by molecular dynamics.
Veluraja K; Margulis CJ
J Biomol Struct Dyn; 2005 Aug; 23(1):101-11. PubMed ID: 15918681
[TBL] [Abstract][Full Text] [Related]
3. Computational modeling of carbohydrate-recognition process in E-selectin complex: structural mapping of sialyl Lewis X onto ab initio QM/MM free energy surface.
Ishida T
J Phys Chem B; 2010 Mar; 114(11):3950-64. PubMed ID: 20078087
[TBL] [Abstract][Full Text] [Related]
4. Epitope mapping of sialyl Lewis(x) bound to E-selectin using saturation transfer difference NMR experiments.
Rinnbauer M; Ernst B; Wagner B; Magnani J; Benie AJ; Peters T
Glycobiology; 2003 Jun; 13(6):435-43. PubMed ID: 12626392
[TBL] [Abstract][Full Text] [Related]
5. Effect of protonation of the N-acetyl neuraminic acid residue of sialyl Lewis(X): a molecular orbital study with insights into its binding properties toward the carbohydrate recognition domain of E-selectin.
Pichierri F; Matsuo Y
Bioorg Med Chem; 2002 Aug; 10(8):2751-7. PubMed ID: 12057664
[TBL] [Abstract][Full Text] [Related]
6. Hyaluronan: the local solution conformation determined by NMR and computer modeling is close to a contracted left-handed 4-fold helix.
Almond A; Deangelis PL; Blundell CD
J Mol Biol; 2006 May; 358(5):1256-69. PubMed ID: 16584748
[TBL] [Abstract][Full Text] [Related]
7. Glycosidic linkage conformation of methyl-alpha-mannopyranoside.
Coskuner O; Bergeron DE; Rincon L; Hudgens JW; Gonzalez CA
J Chem Phys; 2008 Jul; 129(4):045102. PubMed ID: 18681681
[TBL] [Abstract][Full Text] [Related]
8. Quinic acid derivatives as sialyl Lewis(x)-mimicking selectin inhibitors: design, synthesis, and crystal structure in complex with E-selectin.
Kaila N; Somers WS; Thomas BE; Thakker P; Janz K; DeBernardo S; Tam S; Moore WJ; Yang R; Wrona W; Bedard PW; Crommie D; Keith JC; Tsao DH; Alvarez JC; Ni H; Marchese E; Patton JT; Magnani JL; Camphausen RT
J Med Chem; 2005 Jun; 48(13):4346-57. PubMed ID: 15974587
[TBL] [Abstract][Full Text] [Related]
9. Selectin-ligand interactions revealed by molecular dynamics simulation in solution.
Tsujishita H; Hiramatsu Y; Kondo N; Ohmoto H; Kondo H; Kiso M; Hasegawa A
J Med Chem; 1997 Jan; 40(3):362-9. PubMed ID: 9022803
[TBL] [Abstract][Full Text] [Related]
10. Molecular recognition of sialyl Lewis(x) and related saccharides by two lectins.
Haselhorst T; Weimar T; Peters T
J Am Chem Soc; 2001 Oct; 123(43):10705-14. PubMed ID: 11674003
[TBL] [Abstract][Full Text] [Related]
11. Sialyl Lewis(x): a "pre-organized water oligomer"?
Binder FP; Lemme K; Preston RC; Ernst B
Angew Chem Int Ed Engl; 2012 Jul; 51(29):7327-31. PubMed ID: 22782926
[TBL] [Abstract][Full Text] [Related]
12. Comparative epitope mapping with saturation transfer difference NMR of sialyl Lewis(a) compounds and derivatives bound to a monoclonal antibody.
Herfurth L; Ernst B; Wagner B; Ricklin D; Strasser DS; Magnani JL; Benie AJ; Peters T
J Med Chem; 2005 Nov; 48(22):6879-86. PubMed ID: 16250646
[TBL] [Abstract][Full Text] [Related]
13. Crystal structures of the staphylococcal toxin SSL5 in complex with sialyl Lewis X reveal a conserved binding site that shares common features with viral and bacterial sialic acid binding proteins.
Baker HM; Basu I; Chung MC; Caradoc-Davies T; Fraser JD; Baker EN
J Mol Biol; 2007 Dec; 374(5):1298-308. PubMed ID: 17996251
[TBL] [Abstract][Full Text] [Related]
14. Studies on selectin blockers. 6. Discovery of homologous fucose sugar unit necessary for E-selectin binding.
Hiramatsu Y; Moriyama H; Kiyoi T; Tsukida T; Inoue Y; Kondo H
J Med Chem; 1998 Jun; 41(13):2302-7. PubMed ID: 9632363
[TBL] [Abstract][Full Text] [Related]
15. An E-selectin binding assay based on a polyacrylamide-type glycoconjugate.
Weitz-Schmidt G; Stokmaier D; Scheel G; Nifant'ev NE; Tuzikov AB; Bovin NV
Anal Biochem; 1996 Jul; 238(2):184-90. PubMed ID: 8660609
[TBL] [Abstract][Full Text] [Related]
16. Molecular dynamics simulations of alpha2 --> 8-linked disialoside: conformational analysis and implications for binding to proteins.
Vasudevan SV; Balaji PV
Biopolymers; 2002 Mar; 63(3):168-80. PubMed ID: 11787005
[TBL] [Abstract][Full Text] [Related]
17. Structural reorganization of molecular sheets derived from cellulose II by molecular dynamics simulations.
Miyamoto H; Umemura M; Aoyagi T; Yamane C; Ueda K; Takahashi K
Carbohydr Res; 2009 Jun; 344(9):1085-94. PubMed ID: 19375694
[TBL] [Abstract][Full Text] [Related]
18. Towards understanding the interaction between oligosaccharides and water molecules.
Almond A
Carbohydr Res; 2005 Apr; 340(5):907-20. PubMed ID: 15780256
[TBL] [Abstract][Full Text] [Related]
19. Disialogangliosides and their interaction with cholera toxin - investigation by molecular modeling, molecular mechanics and molecular dynamics.
Jeya Sundara Sharmila D; Veluraja K
J Biomol Struct Dyn; 2004 Dec; 22(3):299-313. PubMed ID: 15473704
[TBL] [Abstract][Full Text] [Related]
20. Preferred conformation of the glycosidic linkage of methyl-beta-mannose.
Coskuner O
J Chem Phys; 2007 Jul; 127(1):015101. PubMed ID: 17627368
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
