151 related articles for article (PubMed ID: 18358020)
1. Protein--DNA interactions: reaching and recognizing the targets.
Cherstvy AG; Kolomeisky AB; Kornyshev AA
J Phys Chem B; 2008 Apr; 112(15):4741-50. PubMed ID: 18358020
[TBL] [Abstract][Full Text] [Related]
2. Facilitated search of proteins on DNA: correlations are important.
Das RK; Kolomeisky AB
Phys Chem Chem Phys; 2010 Mar; 12(12):2999-3004. PubMed ID: 20449392
[TBL] [Abstract][Full Text] [Related]
3. Searching DNA via a "Monkey Bar" mechanism: the significance of disordered tails.
Vuzman D; Azia A; Levy Y
J Mol Biol; 2010 Feb; 396(3):674-84. PubMed ID: 19958775
[TBL] [Abstract][Full Text] [Related]
4. Description of nonspecific DNA-protein interaction and facilitated diffusion with a dynamical model.
Florescu AM; Joyeux M
J Chem Phys; 2009 Jan; 130(1):015103. PubMed ID: 19140636
[TBL] [Abstract][Full Text] [Related]
5. Protein sliding along DNA: dynamics and structural characterization.
Givaty O; Levy Y
J Mol Biol; 2009 Jan; 385(4):1087-97. PubMed ID: 19059266
[TBL] [Abstract][Full Text] [Related]
6. Visualizing one-dimensional diffusion of proteins along DNA.
Gorman J; Greene EC
Nat Struct Mol Biol; 2008 Aug; 15(8):768-74. PubMed ID: 18679428
[TBL] [Abstract][Full Text] [Related]
7. Positively charged residues in DNA-binding domains of structural proteins follow sequence-specific positions of DNA phosphate groups.
Cherstvy AG
J Phys Chem B; 2009 Apr; 113(13):4242-7. PubMed ID: 19256532
[TBL] [Abstract][Full Text] [Related]
8. Physics of protein-DNA interactions: mechanisms of facilitated target search.
Kolomeisky AB
Phys Chem Chem Phys; 2011 Feb; 13(6):2088-95. PubMed ID: 21113556
[TBL] [Abstract][Full Text] [Related]
9. How to accelerate protein search on DNA: location and dissociation.
Kolomeisky AB; Veksler A
J Chem Phys; 2012 Mar; 136(12):125101. PubMed ID: 22462896
[TBL] [Abstract][Full Text] [Related]
10. Searching for target sequences by p53 protein is influenced by DNA length.
Brázda V; Jagelská EB; Fojta M; Palecek E
Biochem Biophys Res Commun; 2006 Mar; 341(2):470-7. PubMed ID: 16426567
[TBL] [Abstract][Full Text] [Related]
11. Diffusion constant of a nonspecifically bound protein undergoing curvilinear motion along DNA.
Bagchi B; Blainey PC; Xie XS
J Phys Chem B; 2008 May; 112(19):6282-4. PubMed ID: 18321088
[TBL] [Abstract][Full Text] [Related]
12. The effects of intersegmental transfers on target location by proteins.
Sheinman M; Kafri Y
Phys Biol; 2009 Jan; 6(1):016003. PubMed ID: 19151476
[TBL] [Abstract][Full Text] [Related]
13. One- and three-dimensional pathways for proteins to reach specific DNA sites.
Stanford NP; Szczelkun MD; Marko JF; Halford SE
EMBO J; 2000 Dec; 19(23):6546-57. PubMed ID: 11101527
[TBL] [Abstract][Full Text] [Related]
14. An end to 40 years of mistakes in DNA-protein association kinetics?
Halford SE
Biochem Soc Trans; 2009 Apr; 37(Pt 2):343-8. PubMed ID: 19290859
[TBL] [Abstract][Full Text] [Related]
15. Comparison of kinetic and dynamical models of DNA-protein interaction and facilitated diffusion.
Florescu AM; Joyeux M
J Phys Chem A; 2010 Sep; 114(36):9662-72. PubMed ID: 20394450
[TBL] [Abstract][Full Text] [Related]
16. Single-molecule study of protein-protein and protein-DNA interaction dynamics.
Lu HP
Methods Mol Biol; 2005; 305():385-414. PubMed ID: 15940008
[TBL] [Abstract][Full Text] [Related]
17. Modeling transcription factor binding events to DNA using a random walker/jumper representation on a 1D/2D lattice with different affinity sites.
Rezania V; Tuszynski J; Hendzel M
Phys Biol; 2007 Nov; 4(4):256-67. PubMed ID: 18185004
[TBL] [Abstract][Full Text] [Related]
18. Searching for partially reactive sites: Analytical results for spherical targets.
Grebenkov DS
J Chem Phys; 2010 Jan; 132(3):034104. PubMed ID: 20095725
[TBL] [Abstract][Full Text] [Related]
19. Generalized theory of site-specific DNA-protein interactions.
Murugan R
Phys Rev E Stat Nonlin Soft Matter Phys; 2007 Jul; 76(1 Pt 1):011901. PubMed ID: 17677488
[TBL] [Abstract][Full Text] [Related]
20. How proteins search for their specific sites on DNA: the role of DNA conformation.
Hu T; Grosberg AY; Shklovskii BI
Biophys J; 2006 Apr; 90(8):2731-44. PubMed ID: 16461402
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]