These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

136 related articles for article (PubMed ID: 18361760)

  • 41. An infrastructure for comparative genomics to functionally characterize genes and proteins.
    Suter-Crazzolara C; Kurapkat G
    Genome Inform Ser Workshop Genome Inform; 2000; 11():24-32. PubMed ID: 11700584
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Genomic signal processing methods for computation of alignment-free distances from DNA sequences.
    Borrayo E; Mendizabal-Ruiz EG; Vélez-Pérez H; Romo-Vázquez R; Mendizabal AP; Morales JA
    PLoS One; 2014; 9(11):e110954. PubMed ID: 25393409
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure.
    Gough J; Karplus K; Hughey R; Chothia C
    J Mol Biol; 2001 Nov; 313(4):903-19. PubMed ID: 11697912
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences.
    Forêt S; Kantorovitz MR; Burden CJ
    BMC Bioinformatics; 2006 Dec; 7 Suppl 5(Suppl 5):S21. PubMed ID: 17254306
    [TBL] [Abstract][Full Text] [Related]  

  • 45. The GEM mapper: fast, accurate and versatile alignment by filtration.
    Marco-Sola S; Sammeth M; Guigó R; Ribeca P
    Nat Methods; 2012 Dec; 9(12):1185-8. PubMed ID: 23103880
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Alignment-free phylogenetics and population genetics.
    Haubold B
    Brief Bioinform; 2014 May; 15(3):407-18. PubMed ID: 24291823
    [TBL] [Abstract][Full Text] [Related]  

  • 47. MONI: A Pangenomic Index for Finding Maximal Exact Matches.
    Rossi M; Oliva M; Langmead B; Gagie T; Boucher C
    J Comput Biol; 2022 Feb; 29(2):169-187. PubMed ID: 35041495
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Primary orthologs from local sequence context.
    Gao K; Miller J
    BMC Bioinformatics; 2020 Feb; 21(1):48. PubMed ID: 32028880
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Separating significant matches from spurious matches in DNA sequences.
    Devillers H; Schbath S
    J Comput Biol; 2012 Jan; 19(1):1-12. PubMed ID: 22149632
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Spaced words and kmacs: fast alignment-free sequence comparison based on inexact word matches.
    Horwege S; Lindner S; Boden M; Hatje K; Kollmar M; Leimeister CA; Morgenstern B
    Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W7-11. PubMed ID: 24829447
    [TBL] [Abstract][Full Text] [Related]  

  • 51. GRASPm: an efficient algorithm for exact pattern-matching in genomic sequences.
    Deusdado S; Carvalho P
    Int J Bioinform Res Appl; 2009; 5(4):385-401. PubMed ID: 19640827
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Applying Agrep to r-NSA to solve multiple sequences approximate matching.
    Ni B; Wong MH; Lam CF; Leung KS
    Int J Data Min Bioinform; 2014; 9(4):358-85. PubMed ID: 25757245
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Fast detection of maximal exact matches via fixed sampling of query K-mers and Bloom filtering of index K-mers.
    Liu Y; Zhang LY; Li J
    Bioinformatics; 2019 Nov; 35(22):4560-4567. PubMed ID: 30994891
    [TBL] [Abstract][Full Text] [Related]  

  • 54. ALFRED: A Practical Method for Alignment-Free Distance Computation.
    Thankachan SV; Chockalingam SP; Liu Y; Apostolico A; Aluru S
    J Comput Biol; 2016 Jun; 23(6):452-60. PubMed ID: 27138275
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Homologous synteny block detection based on suffix tree algorithms.
    Chen YL; Chen CM; Pai TW; Leong HW; Chong KF
    J Bioinform Comput Biol; 2013 Dec; 11(6):1343004. PubMed ID: 24372033
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Improving hash-q exact string matching algorithm with perfect hashing for DNA sequences.
    Karcioglu AA; Bulut H
    Comput Biol Med; 2021 Apr; 131():104292. PubMed ID: 33662682
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Efficient maximal repeat finding using the burrows-wheeler transform and wavelet tree.
    Külekci MO; Vitter JS; Xu B
    IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(2):421-9. PubMed ID: 21968959
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Efficient Algorithms for Sequence Analysis with Entropic Profiles.
    Pizzi C; Ornamenti M; Spangaro S; Rombo SE; Parida L
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(1):117-128. PubMed ID: 28113780
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Computation of rank and select functions on hierarchical binary string and its application to genome mapping problems for short-read DNA sequences.
    Kimura K; Suzuki Y; Sugano S; Koike A
    J Comput Biol; 2009 Nov; 16(11):1601-13. PubMed ID: 19772398
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Chaining multiple-alignment blocks.
    Zhang Z; Raghavachari B; Hardison RC; Miller W
    J Comput Biol; 1994; 1(3):217-26. PubMed ID: 8790466
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.