220 related articles for article (PubMed ID: 18387204)
21. Protein structure mining using a structural alphabet.
Tyagi M; de Brevern AG; Srinivasan N; Offmann B
Proteins; 2008 May; 71(2):920-37. PubMed ID: 18004784
[TBL] [Abstract][Full Text] [Related]
22. Development and validation of a consistency based multiple structure alignment algorithm.
Ebert J; Brutlag D
Bioinformatics; 2006 May; 22(9):1080-7. PubMed ID: 16473868
[TBL] [Abstract][Full Text] [Related]
23. A sequence alignment-independent method for protein classification.
Vries JK; Munshi R; Tobi D; Klein-Seetharaman J; Benos PV; Bahar I
Appl Bioinformatics; 2004; 3(2-3):137-48. PubMed ID: 15693739
[TBL] [Abstract][Full Text] [Related]
24. MINER: software for phylogenetic motif identification.
La D; Livesay DR
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W267-70. PubMed ID: 15980467
[TBL] [Abstract][Full Text] [Related]
25. NestedMICA as an ab initio protein motif discovery tool.
Doğruel M; Down TA; Hubbard TJ
BMC Bioinformatics; 2008 Jan; 9():19. PubMed ID: 18194537
[TBL] [Abstract][Full Text] [Related]
26. Searching for three-dimensional secondary structural patterns in proteins with ProSMoS.
Shi S; Zhong Y; Majumdar I; Sri Krishna S; Grishin NV
Bioinformatics; 2007 Jun; 23(11):1331-8. PubMed ID: 17384423
[TBL] [Abstract][Full Text] [Related]
27. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
Mendes ND; Casimiro AC; Santos PM; Sá-Correia I; Oliveira AL; Freitas AT
Bioinformatics; 2006 Dec; 22(24):2996-3002. PubMed ID: 17068086
[TBL] [Abstract][Full Text] [Related]
28. The DISOPRED server for the prediction of protein disorder.
Ward JJ; McGuffin LJ; Bryson K; Buxton BF; Jones DT
Bioinformatics; 2004 Sep; 20(13):2138-9. PubMed ID: 15044227
[TBL] [Abstract][Full Text] [Related]
29. PROMALS web server for accurate multiple protein sequence alignments.
Pei J; Kim BH; Tang M; Grishin NV
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W649-52. PubMed ID: 17452345
[TBL] [Abstract][Full Text] [Related]
30. The ARTS web server for aligning RNA tertiary structures.
Dror O; Nussinov R; Wolfson HJ
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W412-5. PubMed ID: 16845038
[TBL] [Abstract][Full Text] [Related]
31. ProClust: improved clustering of protein sequences with an extended graph-based approach.
Pipenbacher P; Schliep A; Schneckener S; Schönhuth A; Schomburg D; Schrader R
Bioinformatics; 2002; 18 Suppl 2():S182-91. PubMed ID: 12386002
[TBL] [Abstract][Full Text] [Related]
32. DILIMOT: discovery of linear motifs in proteins.
Neduva V; Russell RB
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W350-5. PubMed ID: 16845024
[TBL] [Abstract][Full Text] [Related]
33. CHORAL: a differential geometry approach to the prediction of the cores of protein structures.
Montalvão RW; Smith RE; Lovell SC; Blundell TL
Bioinformatics; 2005 Oct; 21(19):3719-25. PubMed ID: 16046494
[TBL] [Abstract][Full Text] [Related]
34. Motif kernel generated by genetic programming improves remote homology and fold detection.
Håndstad T; Hestnes AJ; Saetrom P
BMC Bioinformatics; 2007 Jan; 8():23. PubMed ID: 17254344
[TBL] [Abstract][Full Text] [Related]
35. Sequence similarities of protein kinase peptide substrates and inhibitors: comparison of their primary structures with immunoglobulin repeats.
Kubrycht J; Borecký J; Sigler K
Folia Microbiol (Praha); 2002; 47(4):319-58. PubMed ID: 12422509
[TBL] [Abstract][Full Text] [Related]
36. MEME: discovering and analyzing DNA and protein sequence motifs.
Bailey TL; Williams N; Misleh C; Li WW
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W369-73. PubMed ID: 16845028
[TBL] [Abstract][Full Text] [Related]
37. Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabet.
Tyagi M; Sharma P; Swamy CS; Cadet F; Srinivasan N; de Brevern AG; Offmann B
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W119-23. PubMed ID: 16844973
[TBL] [Abstract][Full Text] [Related]
38. SCPRED: accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences.
Kurgan L; Cios K; Chen K
BMC Bioinformatics; 2008 May; 9():226. PubMed ID: 18452616
[TBL] [Abstract][Full Text] [Related]
39. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
Yang AS; Honig B
J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
[TBL] [Abstract][Full Text] [Related]
40. 3D-PP: A Tool for Discovering Conserved Three-Dimensional Protein Patterns.
Valdés-Jiménez A; Larriba-Pey JL; Núñez-Vivanco G; Reyes-Parada M
Int J Mol Sci; 2019 Jun; 20(13):. PubMed ID: 31261733
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
