178 related articles for article (PubMed ID: 18408731)
1. DNA apurinic-apyrimidinic site binding and excision by endonuclease IV.
Garcin ED; Hosfield DJ; Desai SA; Haas BJ; Björas M; Cunningham RP; Tainer JA
Nat Struct Mol Biol; 2008 May; 15(5):515-22. PubMed ID: 18408731
[TBL] [Abstract][Full Text] [Related]
2. Mapping the protein-DNA interface and the metal-binding site of the major human apurinic/apyrimidinic endonuclease.
Nguyen LH; Barsky D; Erzberger JP; Wilson DM
J Mol Biol; 2000 May; 298(3):447-59. PubMed ID: 10772862
[TBL] [Abstract][Full Text] [Related]
3. Coupling of the nucleotide incision and 3'-->5' exonuclease activities in Escherichia coli endonuclease IV: Structural and genetic evidences.
Golan G; Ishchenko AA; Khassenov B; Shoham G; Saparbaev MK
Mutat Res; 2010 Mar; 685(1-2):70-9. PubMed ID: 19751747
[TBL] [Abstract][Full Text] [Related]
4. Two divalent metal ions in the active site of a new crystal form of human apurinic/apyrimidinic endonuclease, Ape1: implications for the catalytic mechanism.
Beernink PT; Segelke BW; Hadi MZ; Erzberger JP; Wilson DM; Rupp B
J Mol Biol; 2001 Apr; 307(4):1023-34. PubMed ID: 11286553
[TBL] [Abstract][Full Text] [Related]
5. DNA cleavage by EcoRV endonuclease: two metal ions in three metal ion binding sites.
Horton NC; Perona JJ
Biochemistry; 2004 Jun; 43(22):6841-57. PubMed ID: 15170321
[TBL] [Abstract][Full Text] [Related]
6. Uncoupling of the base excision and nucleotide incision repair pathways reveals their respective biological roles.
Ishchenko AA; Deprez E; Maksimenko A; Brochon JC; Tauc P; Saparbaev MK
Proc Natl Acad Sci U S A; 2006 Feb; 103(8):2564-9. PubMed ID: 16473948
[TBL] [Abstract][Full Text] [Related]
7. Repair of oxidized abasic sites by exonuclease III, endonuclease IV, and endonuclease III.
Greenberg MM; Weledji YN; Kim J; Bales BC
Biochemistry; 2004 Jun; 43(25):8178-83. PubMed ID: 15209514
[TBL] [Abstract][Full Text] [Related]
8. Conserved structural chemistry for incision activity in structurally non-homologous apurinic/apyrimidinic endonuclease APE1 and endonuclease IV DNA repair enzymes.
Tsutakawa SE; Shin DS; Mol CD; Izumi T; Arvai AS; Mantha AK; Szczesny B; Ivanov IN; Hosfield DJ; Maiti B; Pique ME; Frankel KA; Hitomi K; Cunningham RP; Mitra S; Tainer JA
J Biol Chem; 2013 Mar; 288(12):8445-8455. PubMed ID: 23355472
[TBL] [Abstract][Full Text] [Related]
9. Determinants in nuclease specificity of Ape1 and Ape2, human homologues of Escherichia coli exonuclease III.
Hadi MZ; Ginalski K; Nguyen LH; Wilson DM
J Mol Biol; 2002 Feb; 316(3):853-66. PubMed ID: 11866537
[TBL] [Abstract][Full Text] [Related]
10. The role of Mg2+ and specific amino acid residues in the catalytic reaction of the major human abasic endonuclease: new insights from EDTA-resistant incision of acyclic abasic site analogs and site-directed mutagenesis.
Erzberger JP; Wilson DM
J Mol Biol; 1999 Jul; 290(2):447-57. PubMed ID: 10390343
[TBL] [Abstract][Full Text] [Related]
11. Crystal structure of the DNA repair enzyme ultraviolet damage endonuclease.
Paspaleva K; Thomassen E; Pannu NS; Iwai S; Moolenaar GF; Goosen N; Abrahams JP
Structure; 2007 Oct; 15(10):1316-24. PubMed ID: 17937920
[TBL] [Abstract][Full Text] [Related]
12. DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination [corrected].
Mol CD; Izumi T; Mitra S; Tainer JA
Nature; 2000 Jan; 403(6768):451-6. PubMed ID: 10667800
[TBL] [Abstract][Full Text] [Related]
13. Crystal structure and DNA repair activities of the AP endonuclease from Leishmania major.
Vidal AE; Harkiolaki M; Gallego C; Castillo-Acosta VM; Ruiz-Pérez LM; Wilson K; González-Pacanowska D
J Mol Biol; 2007 Nov; 373(4):827-38. PubMed ID: 17870086
[TBL] [Abstract][Full Text] [Related]
14. Structure of the DNA repair enzyme endonuclease IV and its DNA complex: double-nucleotide flipping at abasic sites and three-metal-ion catalysis.
Hosfield DJ; Guan Y; Haas BJ; Cunningham RP; Tainer JA
Cell; 1999 Aug; 98(3):397-408. PubMed ID: 10458614
[TBL] [Abstract][Full Text] [Related]
15. Alpha-anomeric deoxynucleotides, anoxic products of ionizing radiation, are substrates for the endonuclease IV-type AP endonucleases.
Ishchenko AA; Ide H; Ramotar D; Nevinsky G; Saparbaev M
Biochemistry; 2004 Dec; 43(48):15210-6. PubMed ID: 15568813
[TBL] [Abstract][Full Text] [Related]
16. An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA.
Asano R; Ishikawa H; Nakane S; Nakagawa N; Kuramitsu S; Masui R
Acta Crystallogr D Biol Crystallogr; 2011 Mar; 67(Pt 3):149-55. PubMed ID: 21358045
[TBL] [Abstract][Full Text] [Related]
17. A versatile endonuclease IV from Thermus thermophilus has uracil-excising and 3'-5' exonuclease activity.
Back JH; Chung JH; Park JH; Han YS
Biochem Biophys Res Commun; 2006 Aug; 346(3):889-95. PubMed ID: 16782061
[TBL] [Abstract][Full Text] [Related]
18. Major oxidative products of cytosine are substrates for the nucleotide incision repair pathway.
Daviet S; Couvé-Privat S; Gros L; Shinozuka K; Ide H; Saparbaev M; Ishchenko AA
DNA Repair (Amst); 2007 Jan; 6(1):8-18. PubMed ID: 16978929
[TBL] [Abstract][Full Text] [Related]
19. Intragenic suppression of an active site mutation in the human apurinic/apyrimidinic endonuclease.
Izumi T; Malecki J; Chaudhry MA; Weinfeld M; Hill JH; Lee JC; Mitra S
J Mol Biol; 1999 Mar; 287(1):47-57. PubMed ID: 10074406
[TBL] [Abstract][Full Text] [Related]
20. Modulation of the 3'-->5'-exonuclease activity of human apurinic endonuclease (Ape1) by its 5'-incised Abasic DNA product.
Wong D; DeMott MS; Demple B
J Biol Chem; 2003 Sep; 278(38):36242-9. PubMed ID: 12857737
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
