145 related articles for article (PubMed ID: 18428415)
1. Using BLAST for performing sequence alignment.
Healy MD
Curr Protoc Hum Genet; 2007 Jan; Chapter 6():Unit 6.8. PubMed ID: 18428415
[TBL] [Abstract][Full Text] [Related]
2. BLAST: improvements for better sequence analysis.
Ye J; McGinnis S; Madden TL
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W6-9. PubMed ID: 16845079
[TBL] [Abstract][Full Text] [Related]
3. SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters.
Wang C; Lefkowitz EJ
BMC Bioinformatics; 2004 Oct; 5():171. PubMed ID: 15511296
[TBL] [Abstract][Full Text] [Related]
4. muBLASTP: database-indexed protein sequence search on multicore CPUs.
Zhang J; Misra S; Wang H; Feng WC
BMC Bioinformatics; 2016 Nov; 17(1):443. PubMed ID: 27809763
[TBL] [Abstract][Full Text] [Related]
5. Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST).
Dowd SE; Zaragoza J; Rodriguez JR; Oliver MJ; Payton PR
BMC Bioinformatics; 2005 Apr; 6():93. PubMed ID: 15819992
[TBL] [Abstract][Full Text] [Related]
6. GPU-BLAST: using graphics processors to accelerate protein sequence alignment.
Vouzis PD; Sahinidis NV
Bioinformatics; 2011 Jan; 27(2):182-8. PubMed ID: 21088027
[TBL] [Abstract][Full Text] [Related]
7. An efficient algorithm after ungapped analysis in BLAST.
Garg D; Saxena SC; Bhardwaj LM
DNA Seq; 2006 Aug; 17(4):247-53. PubMed ID: 17312943
[TBL] [Abstract][Full Text] [Related]
8. Massively Parallel Implementation of Sequence Alignment with Basic Local Alignment Search Tool Using Parallel Computing in Java Library.
Nowicki M; Bzhalava D; BaŁa P
J Comput Biol; 2018 Aug; 25(8):871-881. PubMed ID: 30004240
[TBL] [Abstract][Full Text] [Related]
9. NCBI Genome Workbench: Desktop Software for Comparative Genomics, Visualization, and GenBank Data Submission.
Kuznetsov A; Bollin CJ
Methods Mol Biol; 2021; 2231():261-295. PubMed ID: 33289898
[TBL] [Abstract][Full Text] [Related]
10. Sequence similarity searching using the BLAST family of programs.
Wolfsberg TG; Madden TL
Curr Protoc Mol Biol; 2001 May; Chapter 19():Unit 19.3. PubMed ID: 18265177
[TBL] [Abstract][Full Text] [Related]
11. Parallelisation of the blast algorithm.
Qi Y; Lin F
Cell Mol Biol Lett; 2005; 10(2):281-5. PubMed ID: 16010293
[TBL] [Abstract][Full Text] [Related]
12. Having a BLAST with bioinformatics (and avoiding BLASTphemy).
Pertsemlidis A; Fondon JW
Genome Biol; 2001; 2(10):REVIEWS2002. PubMed ID: 11597340
[TBL] [Abstract][Full Text] [Related]
13. SWeBLAST: a Sliding Window Web-based BLAST tool for recombinant analysis.
Fourment M; Gibbs AJ; Gibbs MJ
J Virol Methods; 2008 Sep; 152(1-2):98-101. PubMed ID: 18602951
[TBL] [Abstract][Full Text] [Related]
14. BOV--a web-based BLAST output visualization tool.
Gollapudi R; Revanna KV; Hemmerich C; Schaack S; Dong Q
BMC Genomics; 2008 Sep; 9():414. PubMed ID: 18793422
[TBL] [Abstract][Full Text] [Related]
15. Mastering seeds for genomic size nucleotide BLAST searches.
Gotea V; Veeramachaneni V; Makałowski W
Nucleic Acids Res; 2003 Dec; 31(23):6935-41. PubMed ID: 14627826
[TBL] [Abstract][Full Text] [Related]
16. Finding similar nucleotide sequences using network BLAST searches.
Ladunga I
Curr Protoc Bioinformatics; 2009 Jun; Chapter 3():3.3.1-3.3.26. PubMed ID: 19496060
[TBL] [Abstract][Full Text] [Related]
17. BLAST: at the core of a powerful and diverse set of sequence analysis tools.
McGinnis S; Madden TL
Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W20-5. PubMed ID: 15215342
[TBL] [Abstract][Full Text] [Related]
18. Ballast: blast post-processing based on locally conserved segments.
Plewniak F; Thompson JD; Poch O
Bioinformatics; 2000 Sep; 16(9):750-9. PubMed ID: 11108697
[TBL] [Abstract][Full Text] [Related]
19. BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences.
Tatusova TA; Madden TL
FEMS Microbiol Lett; 1999 May; 174(2):247-50. PubMed ID: 10339815
[TBL] [Abstract][Full Text] [Related]
20. Improved gapped alignment in BLAST.
Cameron M; Williams HE; Cannane A
IEEE/ACM Trans Comput Biol Bioinform; 2004; 1(3):116-29. PubMed ID: 17048387
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
