199 related articles for article (PubMed ID: 18428706)
21. A distance metric for a class of tree-sibling phylogenetic networks.
Cardona G; Llabrés M; Rosselló F; Valiente G
Bioinformatics; 2008 Jul; 24(13):1481-8. PubMed ID: 18477576
[TBL] [Abstract][Full Text] [Related]
22. GARD: a genetic algorithm for recombination detection.
Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
Bioinformatics; 2006 Dec; 22(24):3096-8. PubMed ID: 17110367
[TBL] [Abstract][Full Text] [Related]
23. Phylogenetic trees based on gene content.
Huson DH; Steel M
Bioinformatics; 2004 Sep; 20(13):2044-9. PubMed ID: 15044248
[TBL] [Abstract][Full Text] [Related]
24. Constructing and drawing regular planar split networks.
Spillner A; Nguyen BT; Moulton V
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(2):395-407. PubMed ID: 21844634
[TBL] [Abstract][Full Text] [Related]
25. AxML: a fast program for sequential and parallel phylogenetic tree calculations based on the maximum likelihood method.
Stamatakis AP; Ludwig T; Meier H; Wolf MJ
Proc IEEE Comput Soc Bioinform Conf; 2002; 1():21-8. PubMed ID: 15838120
[TBL] [Abstract][Full Text] [Related]
26. Whole-genome prokaryotic phylogeny.
Henz SR; Huson DH; Auch AF; Nieselt-Struwe K; Schuster SC
Bioinformatics; 2005 May; 21(10):2329-35. PubMed ID: 15166018
[TBL] [Abstract][Full Text] [Related]
27. Inferring evolutionary trees with PAUP*.
Wilgenbusch JC; Swofford D
Curr Protoc Bioinformatics; 2003 Feb; Chapter 6():Unit 6.4. PubMed ID: 18428704
[TBL] [Abstract][Full Text] [Related]
28. A hierarchical semiparametric regression model for combining HIV-1 phylogenetic analyses using iterative reweighting algorithms.
Liang LJ; Weiss RE
Biometrics; 2007 Sep; 63(3):733-41. PubMed ID: 17825006
[TBL] [Abstract][Full Text] [Related]
29. Untangling long branches: identifying conflicting phylogenetic signals using spectral analysis, neighbor-net, and consensus networks.
Kennedy M; Holland BR; Gray RD; Spencer HG
Syst Biol; 2005 Aug; 54(4):620-33. PubMed ID: 16109705
[TBL] [Abstract][Full Text] [Related]
30. Clearcut: a fast implementation of relaxed neighbor joining.
Sheneman L; Evans J; Foster JA
Bioinformatics; 2006 Nov; 22(22):2823-4. PubMed ID: 16982706
[TBL] [Abstract][Full Text] [Related]
31. Application of phylogenetic networks in evolutionary studies.
Huson DH; Bryant D
Mol Biol Evol; 2006 Feb; 23(2):254-67. PubMed ID: 16221896
[TBL] [Abstract][Full Text] [Related]
32. DPRml: distributed phylogeny reconstruction by maximum likelihood.
Keane TM; Naughton TJ; Travers SA; McInerney JO; McCormack GP
Bioinformatics; 2005 Apr; 21(7):969-74. PubMed ID: 15513992
[TBL] [Abstract][Full Text] [Related]
33. BOOL-AN: a method for comparative sequence analysis and phylogenetic reconstruction.
Jakó E; Ari E; Ittzés P; Horváth A; Podani J
Mol Phylogenet Evol; 2009 Sep; 52(3):887-97. PubMed ID: 19422923
[TBL] [Abstract][Full Text] [Related]
34. A weighted least-squares approach for inferring phylogenies from incomplete distance matrices.
Makarenkov V; Lapointe FJ
Bioinformatics; 2004 Sep; 20(13):2113-21. PubMed ID: 15059836
[TBL] [Abstract][Full Text] [Related]
35. Efficient approximations for learning phylogenetic HMM models from data.
Jojic V; Jojic N; Meek C; Geiger D; Siepel A; Haussler D; Heckerman D
Bioinformatics; 2004 Aug; 20 Suppl 1():i161-8. PubMed ID: 15262795
[TBL] [Abstract][Full Text] [Related]
36. Reconstructing an ultrametric galled phylogenetic network from a distance matrix.
Chan HL; Jansson J; Lam TW; Yiu SM
J Bioinform Comput Biol; 2006 Aug; 4(4):807-32. PubMed ID: 17007069
[TBL] [Abstract][Full Text] [Related]
37. Using PEBBLE for the evolutionary analysis of serially sampled molecular sequences.
Goode M; Rodrigo AG
Curr Protoc Bioinformatics; 2004 May; Chapter 6():Unit 6.8. PubMed ID: 18428729
[TBL] [Abstract][Full Text] [Related]
38. Fast and accurate phylogenetic reconstruction from high-resolution whole-genome data and a novel robustness estimator.
Lin Y; Rajan V; Moret BM
J Comput Biol; 2011 Sep; 18(9):1131-9. PubMed ID: 21899420
[TBL] [Abstract][Full Text] [Related]
39. Discriminating between rate heterogeneity and interspecific recombination in DNA sequence alignments with phylogenetic factorial hidden Markov models.
Husmeier D
Bioinformatics; 2005 Sep; 21 Suppl 2():ii166-72. PubMed ID: 16204097
[TBL] [Abstract][Full Text] [Related]
40. A program to compute the soft Robinson-Foulds distance between phylogenetic networks.
Lu B; Zhang L; Leong HW
BMC Genomics; 2017 Mar; 18(Suppl 2):111. PubMed ID: 28361712
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
