536 related articles for article (PubMed ID: 18447924)
1. GENOMEPOP: a program to simulate genomes in populations.
Carvajal-RodrÃguez A
BMC Bioinformatics; 2008 Apr; 9():223. PubMed ID: 18447924
[TBL] [Abstract][Full Text] [Related]
2. Recodon: coalescent simulation of coding DNA sequences with recombination, migration and demography.
Arenas M; Posada D
BMC Bioinformatics; 2007 Nov; 8():458. PubMed ID: 18028540
[TBL] [Abstract][Full Text] [Related]
3. Forward-time simulations of human populations with complex diseases.
Peng B; Amos CI; Kimmel M
PLoS Genet; 2007 Mar; 3(3):e47. PubMed ID: 17381243
[TBL] [Abstract][Full Text] [Related]
4. Critical assessment of coalescent simulators in modeling recombination hotspots in genomic sequences.
Yang T; Deng HW; Niu T
BMC Bioinformatics; 2014 Jan; 15():3. PubMed ID: 24387001
[TBL] [Abstract][Full Text] [Related]
5. Rapid forward-in-time simulation at the chromosome and genome level.
Aberer AJ; Stamatakis A
BMC Bioinformatics; 2013 Jul; 14():216. PubMed ID: 23834340
[TBL] [Abstract][Full Text] [Related]
6. An overview of population genetic data simulation.
Yuan X; Miller DJ; Zhang J; Herrington D; Wang Y
J Comput Biol; 2012 Jan; 19(1):42-54. PubMed ID: 22149682
[TBL] [Abstract][Full Text] [Related]
7. Cosi2: an efficient simulator of exact and approximate coalescent with selection.
Shlyakhter I; Sabeti PC; Schaffner SF
Bioinformatics; 2014 Dec; 30(23):3427-9. PubMed ID: 25150247
[TBL] [Abstract][Full Text] [Related]
8. Estimating variable effective population sizes from multiple genomes: a sequentially markov conditional sampling distribution approach.
Sheehan S; Harris K; Song YS
Genetics; 2013 Jul; 194(3):647-62. PubMed ID: 23608192
[TBL] [Abstract][Full Text] [Related]
9. The Bacterial Sequential Markov Coalescent.
De Maio N; Wilson DJ
Genetics; 2017 May; 206(1):333-343. PubMed ID: 28258183
[TBL] [Abstract][Full Text] [Related]
10. SPLATCHE2: a spatially explicit simulation framework for complex demography, genetic admixture and recombination.
Ray N; Currat M; Foll M; Excoffier L
Bioinformatics; 2010 Dec; 26(23):2993-4. PubMed ID: 20956243
[TBL] [Abstract][Full Text] [Related]
11. Sequence-level population simulations over large genomic regions.
Hoggart CJ; Chadeau-Hyam M; Clark TG; Lampariello R; Whittaker JC; De Iorio M; Balding DJ
Genetics; 2007 Nov; 177(3):1725-31. PubMed ID: 17947444
[TBL] [Abstract][Full Text] [Related]
12. SelSim: a program to simulate population genetic data with natural selection and recombination.
Spencer CC; Coop G
Bioinformatics; 2004 Dec; 20(18):3673-5. PubMed ID: 15271777
[TBL] [Abstract][Full Text] [Related]
13. Simulating haplotype blocks in the human genome.
Posada D; Wiuf C
Bioinformatics; 2003 Jan; 19(2):289-90. PubMed ID: 12538254
[TBL] [Abstract][Full Text] [Related]
14. Inference in population genetics using forward and backward, discrete and continuous time processes.
Bergman J; Schrempf D; Kosiol C; Vogl C
J Theor Biol; 2018 Feb; 439():166-180. PubMed ID: 29229523
[TBL] [Abstract][Full Text] [Related]
15. A flexible forward simulator for populations subject to selection and demography.
Hernandez RD
Bioinformatics; 2008 Dec; 24(23):2786-7. PubMed ID: 18842601
[TBL] [Abstract][Full Text] [Related]
16. Simulation of genome-wide evolution under heterogeneous substitution models and complex multispecies coalescent histories.
Arenas M; Posada D
Mol Biol Evol; 2014 May; 31(5):1295-301. PubMed ID: 24557445
[TBL] [Abstract][Full Text] [Related]
17. Recombination estimation under complex evolutionary models with the coalescent composite-likelihood method.
Carvajal-RodrÃguez A; Crandall KA; Posada D
Mol Biol Evol; 2006 Apr; 23(4):817-27. PubMed ID: 16452117
[TBL] [Abstract][Full Text] [Related]
18. Simulating sequences of the human genome with rare variants.
Peng B; Liu X
Hum Hered; 2010; 70(4):287-91. PubMed ID: 21212684
[TBL] [Abstract][Full Text] [Related]
19. Accounting for long-range correlations in genome-wide simulations of large cohorts.
Nelson D; Kelleher J; Ragsdale AP; Moreau C; McVean G; Gravel S
PLoS Genet; 2020 May; 16(5):e1008619. PubMed ID: 32369493
[TBL] [Abstract][Full Text] [Related]
20. Efficient pedigree recording for fast population genetics simulation.
Kelleher J; Thornton KR; Ashander J; Ralph PL
PLoS Comput Biol; 2018 Nov; 14(11):e1006581. PubMed ID: 30383757
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
