388 related articles for article (PubMed ID: 18454729)
21. Computational prediction of nucleosome positioning by calculating the relative fragment frequency index of nucleosomal sequences.
Ogawa R; Kitagawa N; Ashida H; Saito R; Tomita M
FEBS Lett; 2010 Apr; 584(8):1498-502. PubMed ID: 20206172
[TBL] [Abstract][Full Text] [Related]
22. Genome-wide mapping of nucleosome positions in Schizosaccharomyces pombe.
Lantermann A; Strålfors A; Fagerström-Billai F; Korber P; Ekwall K
Methods; 2009 Jul; 48(3):218-25. PubMed ID: 19233281
[TBL] [Abstract][Full Text] [Related]
23. Modulation of cyclobutane pyrimidine dimer formation in a positioned nucleosome containing poly(dA.dT) tracts.
Schieferstein U; Thoma F
Biochemistry; 1996 Jun; 35(24):7705-14. PubMed ID: 8672471
[TBL] [Abstract][Full Text] [Related]
24. Predicting nucleosome positions in yeast: using the absolute frequency.
Zhang Z; Zhang Y; Gutman I
J Biomol Struct Dyn; 2012; 29(5):1081-8. PubMed ID: 22292961
[TBL] [Abstract][Full Text] [Related]
25. Nucleosome positioning determinants.
Fernandez AG; Anderson JN
J Mol Biol; 2007 Aug; 371(3):649-68. PubMed ID: 17586522
[TBL] [Abstract][Full Text] [Related]
26. TGGA repeats impair nucleosome formation.
Cao H; Widlund HR; Simonsson T; Kubista M
J Mol Biol; 1998 Aug; 281(2):253-60. PubMed ID: 9698546
[TBL] [Abstract][Full Text] [Related]
27. Nucleosome assembly on telomeric sequences.
Rossetti L; Cacchione S; Fuà M; Savino M
Biochemistry; 1998 May; 37(19):6727-37. PubMed ID: 9578556
[TBL] [Abstract][Full Text] [Related]
28. Nucleosome positioning signals in genomic DNA.
Peckham HE; Thurman RE; Fu Y; Stamatoyannopoulos JA; Noble WS; Struhl K; Weng Z
Genome Res; 2007 Aug; 17(8):1170-7. PubMed ID: 17620451
[TBL] [Abstract][Full Text] [Related]
29. Nucleosome positioning can affect the function of a cis-acting DNA element in vivo.
Simpson RT
Nature; 1990 Jan; 343(6256):387-9. PubMed ID: 2405281
[TBL] [Abstract][Full Text] [Related]
30. Z curve theory-based analysis of the dynamic nature of nucleosome positioning in Saccharomyces cerevisiae.
Wu X; Liu H; Liu H; Su J; Lv J; Cui Y; Wang F; Zhang Y
Gene; 2013 Nov; 530(1):8-18. PubMed ID: 23958656
[TBL] [Abstract][Full Text] [Related]
31. Role of 10-11bp periodicities of eukaryotic DNA sequence in nucleosome positioning.
Liu H; Lin S; Cai Z; Sun X
Biosystems; 2011 Sep; 105(3):295-9. PubMed ID: 21723367
[TBL] [Abstract][Full Text] [Related]
32. The impact of nucleosome positioning on the organization of replication origins in eukaryotes.
Yin S; Deng W; Hu L; Kong X
Biochem Biophys Res Commun; 2009 Jul; 385(3):363-8. PubMed ID: 19463783
[TBL] [Abstract][Full Text] [Related]
33. Short-range order in two eukaryotic genomes: relation to chromosome structure.
Widom J
J Mol Biol; 1996 Jun; 259(4):579-88. PubMed ID: 8683566
[TBL] [Abstract][Full Text] [Related]
34. Predicting nucleosome-positioning signals: comment on "Cracking the chromatin code: precise rule of nucleosome positioning" by E.N. Trifonov.
Bina M
Phys Life Rev; 2011 Mar; 8(1):59-61; discussion 69-72. PubMed ID: 21292574
[No Abstract] [Full Text] [Related]
35. In silico approaches reveal the potential for DNA sequence-dependent histone octamer affinity to influence chromatin structure in vivo.
Fraser RM; Allan J; Simmen MW
J Mol Biol; 2006 Dec; 364(4):582-98. PubMed ID: 17027853
[TBL] [Abstract][Full Text] [Related]
36. Positional variations among heterogeneous nucleosome maps give dynamical information on chromatin.
Tanaka Y; Yoshimura I; Nakai K
Chromosoma; 2010 Aug; 119(4):391-404. PubMed ID: 20224866
[TBL] [Abstract][Full Text] [Related]
37. The effect of nucleosome phasing sequences and DNA topology on nucleosome spacing.
Blank TA; Becker PB
J Mol Biol; 1996 Jul; 260(1):1-8. PubMed ID: 8676389
[TBL] [Abstract][Full Text] [Related]
38. Yeast nucleosome DNA pattern: deconvolution from genome sequences of S. cerevisiae.
Cohanim AB; Kashi Y; Trifonov EN
J Biomol Struct Dyn; 2005 Jun; 22(6):687-94. PubMed ID: 15842173
[TBL] [Abstract][Full Text] [Related]
39. Genome-wide in vitro reconstitution of yeast chromatin with in vivo-like nucleosome positioning.
Krietenstein N; Wippo CJ; Lieleg C; Korber P
Methods Enzymol; 2012; 513():205-32. PubMed ID: 22929771
[TBL] [Abstract][Full Text] [Related]
40. AFM imaging and theoretical modeling studies of sequence-dependent nucleosome positioning.
Pisano S; Pascucci E; Cacchione S; De Santis P; Savino M
Biophys Chem; 2006 Nov; 124(2):81-9. PubMed ID: 16824667
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]