260 related articles for article (PubMed ID: 18471977)
1. Structures of DNA polymerase beta with active-site mismatches suggest a transient abasic site intermediate during misincorporation.
Batra VK; Beard WA; Shock DD; Pedersen LC; Wilson SH
Mol Cell; 2008 May; 30(3):315-24. PubMed ID: 18471977
[TBL] [Abstract][Full Text] [Related]
2. Mismatch-induced conformational distortions in polymerase beta support an induced-fit mechanism for fidelity.
Arora K; Beard WA; Wilson SH; Schlick T
Biochemistry; 2005 Oct; 44(40):13328-41. PubMed ID: 16201758
[TBL] [Abstract][Full Text] [Related]
3. DNA polymerase beta substrate specificity: side chain modulation of the "A-rule".
Beard WA; Shock DD; Batra VK; Pedersen LC; Wilson SH
J Biol Chem; 2009 Nov; 284(46):31680-9. PubMed ID: 19759017
[TBL] [Abstract][Full Text] [Related]
4. Influence of DNA structure on DNA polymerase beta active site function: extension of mutagenic DNA intermediates.
Beard WA; Shock DD; Wilson SH
J Biol Chem; 2004 Jul; 279(30):31921-9. PubMed ID: 15145936
[TBL] [Abstract][Full Text] [Related]
5. Structural insights into DNA polymerase beta deterrents for misincorporation support an induced-fit mechanism for fidelity.
Krahn JM; Beard WA; Wilson SH
Structure; 2004 Oct; 12(10):1823-32. PubMed ID: 15458631
[TBL] [Abstract][Full Text] [Related]
6. Insights into the effect of minor groove interactions and metal cofactors on mutagenic replication by human DNA polymerase β.
Koag MC; Lee S
Biochem J; 2018 Feb; 475(3):571-585. PubMed ID: 29301983
[TBL] [Abstract][Full Text] [Related]
7. The spontaneous replication error and the mismatch discrimination mechanisms of human DNA polymerase β.
Koag MC; Nam K; Lee S
Nucleic Acids Res; 2014; 42(17):11233-45. PubMed ID: 25200079
[TBL] [Abstract][Full Text] [Related]
8. Mismatched base-pair simulations for ASFV Pol X/DNA complexes help interpret frequent G*G misincorporation.
Sampoli Benítez BA; Arora K; Balistreri L; Schlick T
J Mol Biol; 2008 Dec; 384(5):1086-97. PubMed ID: 18955064
[TBL] [Abstract][Full Text] [Related]
9. Local deformations revealed by dynamics simulations of DNA polymerase Beta with DNA mismatches at the primer terminus.
Yang L; Beard W; Wilson S; Roux B; Broyde S; Schlick T
J Mol Biol; 2002 Aug; 321(3):459-78. PubMed ID: 12162959
[TBL] [Abstract][Full Text] [Related]
10. Loss of DNA polymerase beta stacking interactions with templating purines, but not pyrimidines, alters catalytic efficiency and fidelity.
Beard WA; Shock DD; Yang XP; DeLauder SF; Wilson SH
J Biol Chem; 2002 Mar; 277(10):8235-42. PubMed ID: 11756435
[TBL] [Abstract][Full Text] [Related]
11. Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Batra VK; Beard WA; Pedersen LC; Wilson SH
Structure; 2016 Nov; 24(11):1863-1875. PubMed ID: 27642161
[TBL] [Abstract][Full Text] [Related]
12. DNA polymerase β nucleotide-stabilized template misalignment fidelity depends on local sequence context.
Howard MJ; Cavanaugh NA; Batra VK; Shock DD; Beard WA; Wilson SH
J Biol Chem; 2020 Jan; 295(2):529-538. PubMed ID: 31801827
[TBL] [Abstract][Full Text] [Related]
13. Structural basis for promutagenicity of 8-halogenated guanine.
Koag MC; Min K; Lee S
J Biol Chem; 2014 Feb; 289(9):6289-98. PubMed ID: 24425881
[TBL] [Abstract][Full Text] [Related]
14. Extending the understanding of mutagenicity: structural insights into primer-extension past a benzo[a]pyrene diol epoxide-DNA adduct.
Perlow RA; Broyde S
J Mol Biol; 2003 Apr; 327(4):797-818. PubMed ID: 12654264
[TBL] [Abstract][Full Text] [Related]
15. DNA structure and polymerase fidelity.
Timsit Y
J Mol Biol; 1999 Nov; 293(4):835-53. PubMed ID: 10543971
[TBL] [Abstract][Full Text] [Related]
16. A DNA polymerase beta mutator mutant with reduced nucleotide discrimination and increased protein stability.
Shah AM; Conn DA; Li SX; Capaldi A; Jäger J; Sweasy JB
Biochemistry; 2001 Sep; 40(38):11372-81. PubMed ID: 11560485
[TBL] [Abstract][Full Text] [Related]
17. Nucleotide-induced DNA polymerase active site motions accommodating a mutagenic DNA intermediate.
Batra VK; Beard WA; Shock DD; Pedersen LC; Wilson SH
Structure; 2005 Aug; 13(8):1225-33. PubMed ID: 16084394
[TBL] [Abstract][Full Text] [Related]
18. Promutagenic bypass of 7,8-dihydro-8-oxoadenine by translesion synthesis DNA polymerase Dpo4.
Jung H; Lee S
Biochem J; 2020 Aug; 477(15):2859-2871. PubMed ID: 32686822
[TBL] [Abstract][Full Text] [Related]
19. Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Vaisman A; Ling H; Woodgate R; Yang W
EMBO J; 2005 Sep; 24(17):2957-67. PubMed ID: 16107880
[TBL] [Abstract][Full Text] [Related]
20. Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4.
Wong JH; Fiala KA; Suo Z; Ling H
J Mol Biol; 2008 May; 379(2):317-30. PubMed ID: 18448122
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]