BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

367 related articles for article (PubMed ID: 18474508)

  • 1. DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony.
    Wehe A; Bansal MS; Burleigh JG; Eulenstein O
    Bioinformatics; 2008 Jul; 24(13):1540-1. PubMed ID: 18474508
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Rainbow: a toolbox for phylogenetic supertree construction and analysis.
    Chen D; Eulenstein O; Fernández-Baca D
    Bioinformatics; 2004 Nov; 20(16):2872-3. PubMed ID: 15145807
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Representation in stochastic search for phylogenetic tree reconstruction.
    Weber G; Ohno-Machado L; Shieber S
    J Biomed Inform; 2006 Feb; 39(1):43-50. PubMed ID: 16359929
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Algorithms for genome-scale phylogenetics using gene tree parsimony.
    Bansal MS; Eulenstein O
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(4):939-56. PubMed ID: 24334388
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MulRF: a software package for phylogenetic analysis using multi-copy gene trees.
    Chaudhary R; Fernández-Baca D; Burleigh JG
    Bioinformatics; 2015 Feb; 31(3):432-3. PubMed ID: 25273112
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Inferring phylogeny from whole genomes.
    Górecki P; Tiuryn J
    Bioinformatics; 2007 Jan; 23(2):e116-22. PubMed ID: 17237078
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Species Tree Inference Using a Mixture Model.
    Ullah I; Parviainen P; Lagergren J
    Mol Biol Evol; 2015 Sep; 32(9):2469-82. PubMed ID: 25963975
    [TBL] [Abstract][Full Text] [Related]  

  • 8. ProfDist: a tool for the construction of large phylogenetic trees based on profile distances.
    Friedrich J; Dandekar T; Wolf M; Müller T
    Bioinformatics; 2005 May; 21(9):2108-9. PubMed ID: 15677706
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A novel feature-based method for whole genome phylogenetic analysis without alignment: application to HEV genotyping and subtyping.
    Liu Z; Meng J; Sun X
    Biochem Biophys Res Commun; 2008 Apr; 368(2):223-30. PubMed ID: 18230342
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Serial SimCoal: a population genetics model for data from multiple populations and points in time.
    Anderson CN; Ramakrishnan U; Chan YL; Hadly EA
    Bioinformatics; 2005 Apr; 21(8):1733-4. PubMed ID: 15564305
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Phylocomposer and phylodirector: analysis and visualization of transducer indel models.
    Holmes I
    Bioinformatics; 2007 Dec; 23(23):3263-4. PubMed ID: 17804439
    [TBL] [Abstract][Full Text] [Related]  

  • 12. i-ADHoRe 2.0: an improved tool to detect degenerated genomic homology using genomic profiles.
    Simillion C; Janssens K; Sterck L; Van de Peer Y
    Bioinformatics; 2008 Jan; 24(1):127-8. PubMed ID: 17947255
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Efficient inference on known phylogenetic trees using Poisson regression.
    Rosset S
    Bioinformatics; 2007 Jan; 23(2):e142-7. PubMed ID: 17237083
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Homology assessment and molecular sequence alignment.
    Phillips AJ
    J Biomed Inform; 2006 Feb; 39(1):18-33. PubMed ID: 16380300
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Hetero: a program to simulate the evolution of DNA on a four-taxon tree.
    Jermiin LS; Ho SY; Ababneh F; Robinson J; Larkum AW
    Appl Bioinformatics; 2003; 2(3):159-63. PubMed ID: 15130802
    [TBL] [Abstract][Full Text] [Related]  

  • 16. TreeSnatcher: coding trees from images.
    Laubach T; von Haeseler A
    Bioinformatics; 2007 Dec; 23(24):3384-5. PubMed ID: 17893085
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Approximate maximum parsimony and ancestral maximum likelihood.
    Alon N; Chor B; Pardi F; Rapoport A
    IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(1):183-7. PubMed ID: 20150680
    [TBL] [Abstract][Full Text] [Related]  

  • 18. GARD: a genetic algorithm for recombination detection.
    Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
    Bioinformatics; 2006 Dec; 22(24):3096-8. PubMed ID: 17110367
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Discriminating between rate heterogeneity and interspecific recombination in DNA sequence alignments with phylogenetic factorial hidden Markov models.
    Husmeier D
    Bioinformatics; 2005 Sep; 21 Suppl 2():ii166-72. PubMed ID: 16204097
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Reconstructing phylogenetic networks using maximum parsimony.
    Nakhleh L; Jin G; Zhao F; Mellor-Crummey J
    Proc IEEE Comput Syst Bioinform Conf; 2005; ():93-102. PubMed ID: 16447967
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.