408 related articles for article (PubMed ID: 18487052)
1. Study of the base discrimination ability of DNA and 2'-O-methylated RNA oligomers containing 2-thiouracil bases towards complementary RNA or DNA strands and their application to single base mismatch detection.
Okamoto I; Seio K; Sekine M
Bioorg Med Chem; 2008 Jun; 16(11):6034-41. PubMed ID: 18487052
[TBL] [Abstract][Full Text] [Related]
2. A new route to 2'-O-alkyl-2-thiouridine derivatives via 4-O-protection of the uracil base and hybridization properties of oligonucleotides incorporating these modified nucleoside derivatives.
Okamoto I; Shohda K; Seio K; Sekine M
J Org Chem; 2003 Dec; 68(26):9971-82. PubMed ID: 14682690
[TBL] [Abstract][Full Text] [Related]
3. SNPs analysis by use of oligonucleotides containing 2'-O-methyl-2-thiouridines.
Okamoto I; Seio K; Sekine M
Nucleic Acids Symp Ser (Oxf); 2005; (49):123-4. PubMed ID: 17150664
[TBL] [Abstract][Full Text] [Related]
4. Synthesis and properties of 2'-O-methyl-2-thiouridine and oligoribonucleotides containing 2'-O-methyl-2-thiouridine.
Shohda K; Okamoto I; Wada T; Seio K; Sekine M
Bioorg Med Chem Lett; 2000 Aug; 10(16):1795-8. PubMed ID: 10969970
[TBL] [Abstract][Full Text] [Related]
5. Modified bases in RNA reduce secondary structure and enhance hybridization.
Gamper HB; Gewirtz A; Edwards J; Hou YM
Biochemistry; 2004 Aug; 43(31):10224-36. PubMed ID: 15287750
[TBL] [Abstract][Full Text] [Related]
6. Correlating structure and stability of DNA duplexes with incorporated 2'-O-modified RNA analogues.
Tereshko V; Portmann S; Tay EC; Martin P; Natt F; Altmann KH; Egli M
Biochemistry; 1998 Jul; 37(30):10626-34. PubMed ID: 9692952
[TBL] [Abstract][Full Text] [Related]
7. 3'-modified oligo (2'-O-methylribonucleotides) as improved probes for hybridization with RNA.
Novopashina DS; Totskaya OS; Lomzov AA; Venyaminova AG
Nucleosides Nucleotides Nucleic Acids; 2005; 24(5-7):527-31. PubMed ID: 16247984
[TBL] [Abstract][Full Text] [Related]
8. 2-Thiouracil deprived of thiocarbonyl function preferentially base pairs with guanine rather than adenine in RNA and DNA duplexes.
Sochacka E; Szczepanowski RH; Cypryk M; Sobczak M; Janicka M; Kraszewska K; Bartos P; Chwialkowska A; Nawrot B
Nucleic Acids Res; 2015 Mar; 43(5):2499-512. PubMed ID: 25690900
[TBL] [Abstract][Full Text] [Related]
9. Thermodynamic and kinetic characterization of duplex formation between 2'-O, 4'-C-methylene-modified oligoribonucleotides, DNA and RNA.
Christensen U
Biosci Rep; 2007 Dec; 27(6):327-33. PubMed ID: 17592767
[TBL] [Abstract][Full Text] [Related]
10. Discrimination between perfect and mismatched duplexes with oligonucleotide gel microchips: role of thermodynamic and kinetic effects during hybridization.
Sorokin NV; Chechetkin VR; Livshits MA; Pan'kov SV; Donnikov MY; Gryadunov DA; Lapa SA; Zasedatelev AS
J Biomol Struct Dyn; 2005 Jun; 22(6):725-34. PubMed ID: 15842177
[TBL] [Abstract][Full Text] [Related]
11. Base pair interactions and hybridization isotherms of matched and mismatched oligonucleotide probes on microarrays.
Binder H; Preibisch S; Kirsten T
Langmuir; 2005 Sep; 21(20):9287-302. PubMed ID: 16171364
[TBL] [Abstract][Full Text] [Related]
12. Prediction of the stability of modified RNA duplexes based on deformability analysis: oligoribonucleotide derivatives modified with 2'-O-cyanoethyl-5-propynyl-2-thiouridine as a promising component.
Masaki Y; Miyasaka R; Hirai K; Tsunoda H; Ohkubo A; Seio K; Sekine M
Chem Commun (Camb); 2012 Jul; 48(58):7313-5. PubMed ID: 22710854
[TBL] [Abstract][Full Text] [Related]
13. Modulation of pyrene fluorescence in DNA probes depends upon the nature of the conformationally restricted nucleotide.
Honcharenko D; Zhou C; Chattopadhyaya J
J Org Chem; 2008 Apr; 73(7):2829-42. PubMed ID: 18331060
[TBL] [Abstract][Full Text] [Related]
14. [Analysis of perfect and mismatched DNA duplexes by a generic hexanucleotide microchip].
Khomiakova EB; Livshits MA; Sharonov AIu; Prokopenko DV; Mirzabekov AD
Mol Biol (Mosk); 2003; 37(4):726-41. PubMed ID: 12942647
[TBL] [Abstract][Full Text] [Related]
15. 2'-anthraquinone-conjugated oligonucleotide as an electrochemical probe for DNA mismatch.
Kumamoto S; Watanabe M; Kawakami N; Nakamura M; Yamana K
Bioconjug Chem; 2008 Jan; 19(1):65-9. PubMed ID: 17988077
[TBL] [Abstract][Full Text] [Related]
16. Influences of ribonucleotide on a duplex conformation and its thermal stability: study with the chimeric RNA-DNA strands.
Nakano S; Kanzaki T; Sugimoto N
J Am Chem Soc; 2004 Feb; 126(4):1088-95. PubMed ID: 14746477
[TBL] [Abstract][Full Text] [Related]
17. Synthesis and hybridization of 2'-O-methyl-RNAs incorporating 2'-O-carbamoyluridine and unique participation of the carbamoyl group in U-G base pair.
Seio K; Tawarada R; Sasami T; Serizawa M; Ise M; Ohkubo A; Sekine M
Bioorg Med Chem; 2009 Oct; 17(20):7275-80. PubMed ID: 19783446
[TBL] [Abstract][Full Text] [Related]
18. Detection of terminal mismatches on DNA duplexes with fluorescent oligonucleotides.
Asseline U; Chassignol M; Aubert Y; Roig V
Org Biomol Chem; 2006 May; 4(10):1949-57. PubMed ID: 16688340
[TBL] [Abstract][Full Text] [Related]
19. Triplex forming ability of oligonucleotides containing 2'-O-methyl-2-thiouridine or 2-thiothymidine.
Okamoto I; Seio K; Sekine M
Bioorg Med Chem Lett; 2006 Jun; 16(12):3334-6. PubMed ID: 16631365
[TBL] [Abstract][Full Text] [Related]
20. Effect of terminal amino acids on the stability and specificity of PNA-DNA hybridisation.
Silvester NC; Bushell GR; Searles DJ; Brown CL
Org Biomol Chem; 2007 Mar; 5(6):917-23. PubMed ID: 17340007
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]