138 related articles for article (PubMed ID: 18515399)
1. Distinguishing thermodynamic and kinetic views of the preferential hydration of protein surfaces.
Priya MH; Shah JK; Asthagiri D; Paulaitis ME
Biophys J; 2008 Sep; 95(5):2219-25. PubMed ID: 18515399
[TBL] [Abstract][Full Text] [Related]
2. Light-scattering studies of protein solutions: role of hydration in weak protein-protein interactions.
Paliwal A; Asthagiri D; Abras D; Lenhoff AM; Paulaitis ME
Biophys J; 2005 Sep; 89(3):1564-73. PubMed ID: 15980182
[TBL] [Abstract][Full Text] [Related]
3. Dynamics of hydration in hen egg white lysozyme.
Sterpone F; Ceccarelli M; Marchi M
J Mol Biol; 2001 Aug; 311(2):409-19. PubMed ID: 11478869
[TBL] [Abstract][Full Text] [Related]
4. Molecular dynamics study of water penetration in staphylococcal nuclease.
Damjanović A; García-Moreno B; Lattman EE; García AE
Proteins; 2005 Aug; 60(3):433-49. PubMed ID: 15971206
[TBL] [Abstract][Full Text] [Related]
5. Water molecules in DNA recognition II: a molecular dynamics view of the structure and hydration of the trp operator.
Bonvin AM; Sunnerhagen M; Otting G; van Gunsteren WF
J Mol Biol; 1998 Oct; 282(4):859-73. PubMed ID: 9743632
[TBL] [Abstract][Full Text] [Related]
6. Origin of the dynamic transition upon pressurization of crystalline proteins.
Oleinikova A; Smolin N; Brovchenko I
J Phys Chem B; 2006 Oct; 110(39):19619-24. PubMed ID: 17004829
[TBL] [Abstract][Full Text] [Related]
7. Hydrophobic regions on protein surfaces: definition based on hydration shell structure and a quick method for their computation.
Eisenhaber F; Argos P
Protein Eng; 1996 Dec; 9(12):1121-33. PubMed ID: 9010925
[TBL] [Abstract][Full Text] [Related]
8. Influence of water clustering on the dynamics of hydration water at the surface of a lysozyme.
Oleinikova A; Smolin N; Brovchenko I
Biophys J; 2007 Nov; 93(9):2986-3000. PubMed ID: 17631539
[TBL] [Abstract][Full Text] [Related]
9. Effect of temperature, pressure, and cosolvents on structural and dynamic properties of the hydration shell of SNase: a molecular dynamics computer simulation study.
Smolin N; Winter R
J Phys Chem B; 2008 Jan; 112(3):997-1006. PubMed ID: 18171045
[TBL] [Abstract][Full Text] [Related]
10. Residence times of water molecules in the hydration sites of myoglobin.
Makarov VA; Andrews BK; Smith PE; Pettitt BM
Biophys J; 2000 Dec; 79(6):2966-74. PubMed ID: 11106604
[TBL] [Abstract][Full Text] [Related]
11. Site-specific hydration dynamics of globular proteins and the role of constrained water in solvent exchange with amphiphilic cosolvents.
King JT; Arthur EJ; Brooks CL; Kubarych KJ
J Phys Chem B; 2012 May; 116(19):5604-11. PubMed ID: 22530969
[TBL] [Abstract][Full Text] [Related]
12. Water rotational relaxation and diffusion in hydrated lysozyme.
Marchi M; Sterpone F; Ceccarelli M
J Am Chem Soc; 2002 Jun; 124(23):6787-91. PubMed ID: 12047201
[TBL] [Abstract][Full Text] [Related]
13. Thermodynamic analysis of water molecules at the surface of proteins and applications to binding site prediction and characterization.
Beuming T; Che Y; Abel R; Kim B; Shanmugasundaram V; Sherman W
Proteins; 2012 Mar; 80(3):871-83. PubMed ID: 22223256
[TBL] [Abstract][Full Text] [Related]
14. Hydration-dependent protein dynamics revealed by molecular dynamics simulation of crystalline staphylococcal nuclease.
Joti Y; Nakagawa H; Kataoka M; Kitao A
J Phys Chem B; 2008 Mar; 112(11):3522-8. PubMed ID: 18293961
[TBL] [Abstract][Full Text] [Related]
15. Hydration structure of human lysozyme investigated by molecular dynamics simulation and cryogenic X-ray crystal structure analyses: on the correlation between crystal water sites, solvent density, and solvent dipole.
Higo J; Nakasako M
J Comput Chem; 2002 Nov; 23(14):1323-36. PubMed ID: 12214315
[TBL] [Abstract][Full Text] [Related]
16. Role of flexibility and polarity as determinants of the hydration of internal cavities and pockets in proteins.
Damjanović A; Schlessman JL; Fitch CA; García AE; García-Moreno E B
Biophys J; 2007 Oct; 93(8):2791-804. PubMed ID: 17604315
[TBL] [Abstract][Full Text] [Related]
17. The hydration of globular proteins as derived from volume and compressibility measurements: cross correlating thermodynamic and structural data.
Chalikian TV; Totrov M; Abagyan R; Breslauer KJ
J Mol Biol; 1996 Jul; 260(4):588-603. PubMed ID: 8759322
[TBL] [Abstract][Full Text] [Related]
18. Molecular dynamics simulation of proteins under high pressure: Structure, function and thermodynamics.
Hata H; Nishiyama M; Kitao A
Biochim Biophys Acta Gen Subj; 2020 Feb; 1864(2):129395. PubMed ID: 31302180
[TBL] [Abstract][Full Text] [Related]
19. Molecular anatomy of preferential interaction coefficients by elucidating protein solvation in mixed solvents: methodology and application for lysozyme in aqueous glycerol.
Vagenende V; Yap MG; Trout BL
J Phys Chem B; 2009 Aug; 113(34):11743-53. PubMed ID: 19653677
[TBL] [Abstract][Full Text] [Related]
20. Protein surface hydration mapped by site-specific mutations.
Qiu W; Kao YT; Zhang L; Yang Y; Wang L; Stites WE; Zhong D; Zewail AH
Proc Natl Acad Sci U S A; 2006 Sep; 103(38):13979-84. PubMed ID: 16968773
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
