These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
42. Noise reduction in genome-wide perturbation screens using linear mixed-effect models. Yu D; Danku J; Baxter I; Kim S; Vatamaniuk OK; Salt DE; Vitek O Bioinformatics; 2011 Aug; 27(16):2173-80. PubMed ID: 21685046 [TBL] [Abstract][Full Text] [Related]
43. Automatic identification and clustering of chromosome phenotypes in a genome wide RNAi screen by time-lapse imaging. Walter T; Held M; Neumann B; Hériché JK; Conrad C; Pepperkok R; Ellenberg J J Struct Biol; 2010 Apr; 170(1):1-9. PubMed ID: 19854275 [TBL] [Abstract][Full Text] [Related]
44. Whole-animal high-throughput screens: the C. elegans model. O'Rourke EJ; Conery AL; Moy TI Methods Mol Biol; 2009; 486():57-75. PubMed ID: 19347616 [TBL] [Abstract][Full Text] [Related]
45. TOPS: a versatile software tool for statistical analysis and visualization of combinatorial gene-gene and gene-drug interaction screens. Muellner MK; Duernberger G; Ganglberger F; Kerzendorfer C; Uras IZ; Schoenegger A; Bagienski K; Colinge J; Nijman SM BMC Bioinformatics; 2014 Apr; 15():98. PubMed ID: 24712852 [TBL] [Abstract][Full Text] [Related]
46. A protein network-guided screen for cell cycle regulators in Drosophila. Guest ST; Yu J; Liu D; Hines JA; Kashat MA; Finley RL BMC Syst Biol; 2011 May; 5():65. PubMed ID: 21548953 [TBL] [Abstract][Full Text] [Related]
47. Automatic segmentation of high-throughput RNAi fluorescent cellular images. Yan P; Zhou X; Shah M; Wong ST IEEE Trans Inf Technol Biomed; 2008 Jan; 12(1):109-17. PubMed ID: 18270043 [TBL] [Abstract][Full Text] [Related]
48. Design and evaluation of genome-wide libraries for RNA interference screens. Horn T; Sandmann T; Boutros M Genome Biol; 2010; 11(6):R61. PubMed ID: 20550664 [TBL] [Abstract][Full Text] [Related]
49. Median absolute deviation to improve hit selection for genome-scale RNAi screens. Chung N; Zhang XD; Kreamer A; Locco L; Kuan PF; Bartz S; Linsley PS; Ferrer M; Strulovici B J Biomol Screen; 2008 Feb; 13(2):149-58. PubMed ID: 18216396 [TBL] [Abstract][Full Text] [Related]
50. Discovery of novel targets with high throughput RNA interference screening. Kassner PD Comb Chem High Throughput Screen; 2008 Mar; 11(3):175-84. PubMed ID: 18336211 [TBL] [Abstract][Full Text] [Related]
51. Large-scale image-based screening and profiling of cellular phenotypes. Bougen-Zhukov N; Loh SY; Lee HK; Loo LH Cytometry A; 2017 Feb; 91(2):115-125. PubMed ID: 27434125 [TBL] [Abstract][Full Text] [Related]
52. Cell perturbation screens for target identification by RNAi. Demir K; Boutros M Methods Mol Biol; 2012; 910():1-13. PubMed ID: 22821589 [TBL] [Abstract][Full Text] [Related]
53. Compound classification using image-based cellular phenotypes. Adams CL; Kutsyy V; Coleman DA; Cong G; Crompton AM; Elias KA; Oestreicher DR; Trautman JK; Vaisberg E Methods Enzymol; 2006; 414():440-68. PubMed ID: 17110206 [TBL] [Abstract][Full Text] [Related]
54. High content screening in neurodegenerative diseases. Jain S; van Kesteren RE; Heutink P J Vis Exp; 2012 Jan; (59):e3452. PubMed ID: 22257990 [TBL] [Abstract][Full Text] [Related]
55. High-throughput RNA interference strategies for target discovery and validation by using synthetic short interfering RNAs: functional genomics investigations of biological pathways. Sachse C; Krausz E; Krönke A; Hannus M; Walsh A; Grabner A; Ovcharenko D; Dorris D; Trudel C; Sönnichsen B; Echeverri CJ Methods Enzymol; 2005; 392():242-77. PubMed ID: 15644186 [TBL] [Abstract][Full Text] [Related]
56. cellXpress: a fast and user-friendly software platform for profiling cellular phenotypes. Laksameethanasan D; Tan R; Toh G; Loo LH BMC Bioinformatics; 2013; 14 Suppl 16(Suppl 16):S4. PubMed ID: 24564609 [TBL] [Abstract][Full Text] [Related]
57. An effective method for controlling false discovery and false nondiscovery rates in genome-scale RNAi screens. Zhang XD J Biomol Screen; 2010 Oct; 15(9):1116-22. PubMed ID: 20855561 [TBL] [Abstract][Full Text] [Related]