BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

121 related articles for article (PubMed ID: 18535082)

  • 1. Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification.
    Martin C; Diaz NN; Ontrup J; Nattkemper TW
    Bioinformatics; 2008 Jul; 24(14):1568-74. PubMed ID: 18535082
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Large-scale data exploration with the hierarchically growing hyperbolic SOM.
    Ontrup J; Ritter H
    Neural Netw; 2006; 19(6-7):751-61. PubMed ID: 16806818
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A normalization strategy applied to HiCEP (an AFLP-based expression profiling) analysis: toward the strict alignment of valid fragments across electrophoretic patterns.
    Kadota K; Fukumura R; Rodrigue JJ; Araki R; Abe M
    BMC Bioinformatics; 2005 Mar; 6():43. PubMed ID: 15748295
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Self-Organizing Map (SOM) unveils and visualizes hidden sequence characteristics of a wide range of eukaryote genomes.
    Abe T; Sugawara H; Kanaya S; Kinouchi M; Ikemura T
    Gene; 2006 Jan; 365():27-34. PubMed ID: 16364569
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Self-organizing neural networks to support the discovery of DNA-binding motifs.
    Mahony S; Benos PV; Smith TJ; Golden A
    Neural Netw; 2006; 19(6-7):950-62. PubMed ID: 16839740
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparison of statistical methods to classify environmental genomic fragments.
    Rosen GL; Essinger SD
    IEEE Trans Nanobioscience; 2010 Dec; 9(4):310-6. PubMed ID: 20876033
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.
    Abe T; Sugawara H; Kinouchi M; Kanaya S; Ikemura T
    DNA Res; 2005; 12(5):281-90. PubMed ID: 16769690
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A novel bioinformatic strategy for unveiling hidden genome signatures of eukaryotes: self-organizing map of oligonucleotide frequency.
    Abe T; Kanaya S; Kinouchi M; Ichiba Y; Kozuki T; Ikemura T
    Genome Inform; 2002; 13():12-20. PubMed ID: 14571370
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Improving the performance of self-organizing maps via growing representations.
    Merkow M; DeLisle RK
    J Chem Inf Model; 2007; 47(5):1797-807. PubMed ID: 17705465
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Large-scale genome clustering across life based on a linguistic approach.
    Kirzhner V; Bolshoy A; Volkovich Z; Korol A; Nevo E
    Biosystems; 2005 Sep; 81(3):208-22. PubMed ID: 15936870
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Machine learning: an indispensable tool in bioinformatics.
    Inza I; Calvo B; Armañanzas R; Bengoetxea E; Larrañaga P; Lozano JA
    Methods Mol Biol; 2010; 593():25-48. PubMed ID: 19957143
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Applying hybrid reasoning to mine for associative features in biological data.
    Galitsky BA; Kuznetsov SO; Vinogradov DV
    J Biomed Inform; 2007 Jun; 40(3):203-20. PubMed ID: 16942918
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Phylogeny and identification of Pantoea species associated with plants, humans and the natural environment based on multilocus sequence analysis (MLSA).
    Brady C; Cleenwerck I; Venter S; Vancanneyt M; Swings J; Coutinho T
    Syst Appl Microbiol; 2008 Dec; 31(6-8):447-60. PubMed ID: 19008066
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Information-theoretic approaches to SVM feature selection for metagenome read classification.
    Garbarine E; DePasquale J; Gadia V; Polikar R; Rosen G
    Comput Biol Chem; 2011 Jun; 35(3):199-209. PubMed ID: 21704267
    [TBL] [Abstract][Full Text] [Related]  

  • 15. TreeSOM: Cluster analysis in the self-organizing map.
    Samsonova EV; Kok JN; Ijzerman AP
    Neural Netw; 2006; 19(6-7):935-49. PubMed ID: 16781116
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Tumor classification ranking from microarray data.
    Hewett R; Kijsanayothin P
    BMC Genomics; 2008 Sep; 9 Suppl 2(Suppl 2):S21. PubMed ID: 18831787
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Using RSAT oligo-analysis and dyad-analysis tools to discover regulatory signals in nucleic sequences.
    Defrance M; Janky R; Sand O; van Helden J
    Nat Protoc; 2008; 3(10):1589-603. PubMed ID: 18802440
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Developing markers for multilocus phylogenetics in non-model organisms: A test case with turtles.
    Thomson RC; Shedlock AM; Edwards SV; Shaffer HB
    Mol Phylogenet Evol; 2008 Nov; 49(2):514-25. PubMed ID: 18761096
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Optimal spliced alignments of short sequence reads.
    De Bona F; Ossowski S; Schneeberger K; Rätsch G
    Bioinformatics; 2008 Aug; 24(16):i174-80. PubMed ID: 18689821
    [TBL] [Abstract][Full Text] [Related]  

  • 20. SOrt-ITEMS: Sequence orthology based approach for improved taxonomic estimation of metagenomic sequences.
    Monzoorul Haque M; Ghosh TS; Komanduri D; Mande SS
    Bioinformatics; 2009 Jul; 25(14):1722-30. PubMed ID: 19439565
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.