BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

178 related articles for article (PubMed ID: 18539732)

  • 1. Amino acid residues in the GIY-YIG endonuclease II of phage T4 affecting sequence recognition and binding as well as catalysis.
    Lagerbäck P; Carlson K
    J Bacteriol; 2008 Aug; 190(16):5533-44. PubMed ID: 18539732
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Structure of bacteriophage T4 endonuclease II mutant E118A, a tetrameric GIY-YIG enzyme.
    Andersson CE; Lagerbäck P; Carlson K
    J Mol Biol; 2010 Apr; 397(4):1003-16. PubMed ID: 20156453
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Configuration of the catalytic GIY-YIG domain of intron endonuclease I-TevI: coincidence of computational and molecular findings.
    Kowalski JC; Belfort M; Stapleton MA; Holpert M; Dansereau JT; Pietrokovski S; Baxter SM; Derbyshire V
    Nucleic Acids Res; 1999 May; 27(10):2115-25. PubMed ID: 10219084
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI.
    Van Roey P; Meehan L; Kowalski JC; Belfort M; Derbyshire V
    Nat Struct Biol; 2002 Nov; 9(11):806-11. PubMed ID: 12379841
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Folding, DNA recognition, and function of GIY-YIG endonucleases: crystal structures of R.Eco29kI.
    Mak AN; Lambert AR; Stoddard BL
    Structure; 2010 Oct; 18(10):1321-31. PubMed ID: 20800503
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Distance determination by GIY-YIG intron endonucleases: discrimination between repression and cleavage functions.
    Liu Q; Derbyshire V; Belfort M; Edgell DR
    Nucleic Acids Res; 2006; 34(6):1755-64. PubMed ID: 16582101
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Two-domain structure of the td intron-encoded endonuclease I-TevI correlates with the two-domain configuration of the homing site.
    Derbyshire V; Kowalski JC; Dansereau JT; Hauer CR; Belfort M
    J Mol Biol; 1997 Feb; 265(5):494-506. PubMed ID: 9048944
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Type II restriction endonuclease R.Eco29kI is a member of the GIY-YIG nuclease superfamily.
    Ibryashkina EM; Zakharova MV; Baskunov VB; Bogdanova ES; Nagornykh MO; Den'mukhamedov MM; Melnik BS; Kolinski A; Gront D; Feder M; Solonin AS; Bujnicki JM
    BMC Struct Biol; 2007 Jul; 7():48. PubMed ID: 17626614
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Three-dimensional modeling of the I-TevI homing endonuclease catalytic domain, a GIY-YIG superfamily member, using NMR restraints and Monte Carlo dynamics.
    Bujnicki JM; Rotkiewicz P; Kolinski A; Rychlewski L
    Protein Eng; 2001 Oct; 14(10):717-21. PubMed ID: 11739889
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Bacteriophage T4 endonuclease II, a promiscuous GIY-YIG nuclease, binds as a tetramer to two DNA substrates.
    Lagerbäck P; Andersson E; Malmberg C; Carlson K
    Nucleic Acids Res; 2009 Oct; 37(18):6174-83. PubMed ID: 19666720
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Phage T4 endonuclease SegD that is similar to group I intron endonucleases does not initiate homing of its own gene.
    Sokolov AS; Latypov OR; Kolosov PM; Shlyapnikov MG; Bezlepkina TA; Kholod NS; Kadyrov FA; Granovsky IE
    Virology; 2018 Feb; 515():215-222. PubMed ID: 29306059
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Phage T4 SegB protein is a homing endonuclease required for the preferred inheritance of T4 tRNA gene region occurring in co-infection with a related phage.
    Brok-Volchanskaya VS; Kadyrov FA; Sivogrivov DE; Kolosov PM; Sokolov AS; Shlyapnikov MG; Kryukov VM; Granovsky IE
    Nucleic Acids Res; 2008 Apr; 36(6):2094-105. PubMed ID: 18281701
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Biochemical and mutagenic analysis of I-CreII reveals distinct but important roles for both the H-N-H and GIY-YIG motifs.
    Corina LE; Qiu W; Desai A; Herrin DL
    Nucleic Acids Res; 2009 Sep; 37(17):5810-21. PubMed ID: 19651876
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Strand-specific contacts and divalent metal ion regulate double-strand break formation by the GIY-YIG homing endonuclease I-BmoI.
    Carter JM; Friedrich NC; Kleinstiver B; Edgell DR
    J Mol Biol; 2007 Nov; 374(2):306-21. PubMed ID: 17936302
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SegG endonuclease promotes marker exclusion and mediates co-conversion from a distant cleavage site.
    Liu Q; Belle A; Shub DA; Belfort M; Edgell DR
    J Mol Biol; 2003 Nov; 334(1):13-23. PubMed ID: 14596796
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Structural insights into the first incision reaction during nucleotide excision repair.
    Truglio JJ; Rhau B; Croteau DL; Wang L; Skorvaga M; Karakas E; DellaVecchia MJ; Wang H; Van Houten B; Kisker C
    EMBO J; 2005 Mar; 24(5):885-94. PubMed ID: 15692561
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Intronless homing: site-specific endonuclease SegF of bacteriophage T4 mediates localized marker exclusion analogous to homing endonucleases of group I introns.
    Belle A; Landthaler M; Shub DA
    Genes Dev; 2002 Feb; 16(3):351-62. PubMed ID: 11825876
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Type II restriction endonuclease R.Hpy188I belongs to the GIY-YIG nuclease superfamily, but exhibits an unusual active site.
    Kaminska KH; Kawai M; Boniecki M; Kobayashi I; Bujnicki JM
    BMC Struct Biol; 2008 Nov; 8():48. PubMed ID: 19014591
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Related homing endonucleases I-BmoI and I-TevI use different strategies to cleave homologous recognition sites.
    Edgell DR; Shub DA
    Proc Natl Acad Sci U S A; 2001 Jul; 98(14):7898-903. PubMed ID: 11416170
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Tetrameric restriction enzymes: expansion to the GIY-YIG nuclease family.
    Gasiunas G; Sasnauskas G; Tamulaitis G; Urbanke C; Razaniene D; Siksnys V
    Nucleic Acids Res; 2008 Feb; 36(3):938-49. PubMed ID: 18086711
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.