198 related articles for article (PubMed ID: 18546504)
1. Comparative pair-wise domain-combinations for screening the clade specific domain-architectures in metazoan genomes.
Kawashima S; Kawashima T; Putnam NH; Rokhsar DS; Wada H; Kanehisa M
Genome Inform; 2007; 19():50-60. PubMed ID: 18546504
[TBL] [Abstract][Full Text] [Related]
2. The relationship between domain duplication and recombination.
Vogel C; Teichmann SA; Pereira-Leal J
J Mol Biol; 2005 Feb; 346(1):355-65. PubMed ID: 15663950
[TBL] [Abstract][Full Text] [Related]
3. Quantification of the elevated rate of domain rearrangements in metazoa.
Ekman D; Björklund AK; Elofsson A
J Mol Biol; 2007 Oct; 372(5):1337-48. PubMed ID: 17689563
[TBL] [Abstract][Full Text] [Related]
4. SMART 4.0: towards genomic data integration.
Letunic I; Copley RR; Schmidt S; Ciccarelli FD; Doerks T; Schultz J; Ponting CP; Bork P
Nucleic Acids Res; 2004 Jan; 32(Database issue):D142-4. PubMed ID: 14681379
[TBL] [Abstract][Full Text] [Related]
5. Domain combinations in archaeal, eubacterial and eukaryotic proteomes.
Apic G; Gough J; Teichmann SA
J Mol Biol; 2001 Jul; 310(2):311-25. PubMed ID: 11428892
[TBL] [Abstract][Full Text] [Related]
6. Systematic searches for molecular synapomorphies in model metazoan genomes give some support for Ecdysozoa after accounting for the idiosyncrasies of Caenorhabditis elegans.
Copley RR; Aloy P; Russell RB; Telford MJ
Evol Dev; 2004; 6(3):164-9. PubMed ID: 15099303
[TBL] [Abstract][Full Text] [Related]
7. Gene fusion/fission is a major contributor to evolution of multi-domain bacterial proteins.
Pasek S; Risler JL; Brézellec P
Bioinformatics; 2006 Jun; 22(12):1418-23. PubMed ID: 16601004
[TBL] [Abstract][Full Text] [Related]
8. Global phylogeny determined by the combination of protein domains in proteomes.
Wang M; Caetano-Anollés G
Mol Biol Evol; 2006 Dec; 23(12):2444-54. PubMed ID: 16971695
[TBL] [Abstract][Full Text] [Related]
9. DomainSieve: a protein domain-based screen that led to the identification of dam-associated genes with potential link to DNA maintenance.
Brézellec P; Hoebeke M; Hiet MS; Pasek S; Ferat JL
Bioinformatics; 2006 Aug; 22(16):1935-41. PubMed ID: 16787973
[TBL] [Abstract][Full Text] [Related]
10. Domain tree-based analysis of protein architecture evolution.
Forslund K; Henricson A; Hollich V; Sonnhammer EL
Mol Biol Evol; 2008 Feb; 25(2):254-64. PubMed ID: 18025066
[TBL] [Abstract][Full Text] [Related]
11. Integrin evolution: insights from ascidian and teleost fish genomes.
Huhtala M; Heino J; Casciari D; de Luise A; Johnson MS
Matrix Biol; 2005 Apr; 24(2):83-95. PubMed ID: 15890260
[TBL] [Abstract][Full Text] [Related]
12. Alignments of mitochondrial genome arrangements: applications to metazoan phylogeny.
Fritzsch G; Schlegel M; Stadler PF
J Theor Biol; 2006 Jun; 240(4):511-20. PubMed ID: 16325206
[TBL] [Abstract][Full Text] [Related]
13. A model of globin evolution.
Vinogradov SN; Hoogewijs D; Bailly X; Mizuguchi K; Dewilde S; Moens L; Vanfleteren JR
Gene; 2007 Aug; 398(1-2):132-42. PubMed ID: 17540514
[TBL] [Abstract][Full Text] [Related]
14. Significant expansion of exon-bordering protein domains during animal proteome evolution.
Liu M; Walch H; Wu S; Grigoriev A
Nucleic Acids Res; 2005; 33(1):95-105. PubMed ID: 15640447
[TBL] [Abstract][Full Text] [Related]
15. Domain rearrangements in protein evolution.
Björklund AK; Ekman D; Light S; Frey-Skött J; Elofsson A
J Mol Biol; 2005 Nov; 353(4):911-23. PubMed ID: 16198373
[TBL] [Abstract][Full Text] [Related]
16. The structure of the protein universe and genome evolution.
Koonin EV; Wolf YI; Karev GP
Nature; 2002 Nov; 420(6912):218-23. PubMed ID: 12432406
[TBL] [Abstract][Full Text] [Related]
17. Protein domains and architectural innovation in plant-associated Proteobacteria.
Studholme DJ; Downie JA; Preston GM
BMC Genomics; 2005 Feb; 6():17. PubMed ID: 15715905
[TBL] [Abstract][Full Text] [Related]
18. Phylogenetic analysis and evolution of aromatic amino acid hydroxylase.
Cao J; Shi F; Liu X; Huang G; Zhou M
FEBS Lett; 2010 Dec; 584(23):4775-82. PubMed ID: 21073869
[TBL] [Abstract][Full Text] [Related]
19. The evolutionary mechanics of domain organization in proteomes and the rise of modularity in the protein world.
Wang M; Caetano-Anollés G
Structure; 2009 Jan; 17(1):66-78. PubMed ID: 19141283
[TBL] [Abstract][Full Text] [Related]
20. Origins, lineage-specific expansions, and multiple losses of tyrosine kinases in eukaryotes.
Shiu SH; Li WH
Mol Biol Evol; 2004 May; 21(5):828-40. PubMed ID: 14963097
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
