578 related articles for article (PubMed ID: 18592192)
1. Database similarity searches.
Plewniak F
Methods Mol Biol; 2008; 484():361-78. PubMed ID: 18592192
[TBL] [Abstract][Full Text] [Related]
2. Protein structural similarity search by Ramachandran codes.
Lo WC; Huang PJ; Chang CH; Lyu PC
BMC Bioinformatics; 2007 Aug; 8():307. PubMed ID: 17716377
[TBL] [Abstract][Full Text] [Related]
3. Blast sampling for structural and functional analyses.
Friedrich A; Ripp R; Garnier N; Bettler E; Deléage G; Poch O; Moulinier L
BMC Bioinformatics; 2007 Feb; 8():62. PubMed ID: 17319945
[TBL] [Abstract][Full Text] [Related]
4. A tool for analyzing and annotating genomic sequences.
Huang X; Adams MD; Zhou H; Kerlavage AR
Genomics; 1997 Nov; 46(1):37-45. PubMed ID: 9403056
[TBL] [Abstract][Full Text] [Related]
5. NdPASA: a novel pairwise protein sequence alignment algorithm that incorporates neighbor-dependent amino acid propensities.
Wang J; Feng JA
Proteins; 2005 Feb; 58(3):628-37. PubMed ID: 15616964
[TBL] [Abstract][Full Text] [Related]
6. SIMAP--the similarity matrix of proteins.
Arnold R; Rattei T; Tischler P; Truong MD; Stümpflen V; Mewes W
Bioinformatics; 2005 Sep; 21 Suppl 2():ii42-6. PubMed ID: 16204123
[TBL] [Abstract][Full Text] [Related]
7. A genetic similarity algorithm for searching the Gene Ontology terms and annotating anonymous protein sequences.
Othman RM; Deris S; Illias RM
J Biomed Inform; 2008 Feb; 41(1):65-81. PubMed ID: 17681495
[TBL] [Abstract][Full Text] [Related]
8. A sequence property approach to searching protein databases.
Hobohm U; Sander C
J Mol Biol; 1995 Aug; 251(3):390-9. PubMed ID: 7650738
[TBL] [Abstract][Full Text] [Related]
9. Sequence database searches via de novo peptide sequencing by tandem mass spectrometry.
Taylor JA; Johnson RS
Rapid Commun Mass Spectrom; 1997; 11(9):1067-75. PubMed ID: 9204580
[TBL] [Abstract][Full Text] [Related]
10. An adaptive and iterative algorithm for refining multiple sequence alignment.
Wang Y; Li KB
Comput Biol Chem; 2004 Apr; 28(2):141-8. PubMed ID: 15130542
[TBL] [Abstract][Full Text] [Related]
11. BLAST and FASTA similarity searching for multiple sequence alignment.
Pearson WR
Methods Mol Biol; 2014; 1079():75-101. PubMed ID: 24170396
[TBL] [Abstract][Full Text] [Related]
12. Filtering redundancies for sequence similarity search programs.
Cantalloube H; Chomilier J; Chiusa S; Lonquety M; Spadoni JL; Zagury JF
J Biomol Struct Dyn; 2005 Feb; 22(4):487-92. PubMed ID: 15588112
[TBL] [Abstract][Full Text] [Related]
13. Benchmarking PSI-BLAST in genome annotation.
Müller A; MacCallum RM; Sternberg MJ
J Mol Biol; 1999 Nov; 293(5):1257-71. PubMed ID: 10547299
[TBL] [Abstract][Full Text] [Related]
14. Efficient recognition of protein fold at low sequence identity by conservative application of Psi-BLAST: validation.
Stevens FJ
J Mol Recognit; 2005; 18(2):139-49. PubMed ID: 15558595
[TBL] [Abstract][Full Text] [Related]
15. Identification of homologs in insignificant blast hits by exploiting extrinsic gene properties.
Boekhorst J; Snel B
BMC Bioinformatics; 2007 Sep; 8():356. PubMed ID: 17888146
[TBL] [Abstract][Full Text] [Related]
16. Comparison of sequence and structure alignments for protein domains.
Marchler-Bauer A; Panchenko AR; Ariel N; Bryant SH
Proteins; 2002 Aug; 48(3):439-46. PubMed ID: 12112669
[TBL] [Abstract][Full Text] [Related]
17. Identification of putative domain linkers by a neural network - application to a large sequence database.
Miyazaki S; Kuroda Y; Yokoyama S
BMC Bioinformatics; 2006 Jun; 7():323. PubMed ID: 16800897
[TBL] [Abstract][Full Text] [Related]
18. Identifying remote protein homologs by network propagation.
Noble WS; Kuang R; Leslie C; Weston J
FEBS J; 2005 Oct; 272(20):5119-28. PubMed ID: 16218946
[TBL] [Abstract][Full Text] [Related]
19. Peptide sequence tags for fast database search in mass-spectrometry.
Frank A; Tanner S; Bafna V; Pevzner P
J Proteome Res; 2005; 4(4):1287-95. PubMed ID: 16083278
[TBL] [Abstract][Full Text] [Related]
20. The global trace graph, a novel paradigm for searching protein sequence databases.
Heger A; Mallick S; Wilton C; Holm L
Bioinformatics; 2007 Sep; 23(18):2361-7. PubMed ID: 17823134
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]