These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
323 related articles for article (PubMed ID: 18624501)
1. Dipole-induced self-assembly of helical beta-peptides. Miller CA; Hernández-Ortiz JP; Abbott NL; Gellman SH; de Pablo JJ J Chem Phys; 2008 Jul; 129(1):015102. PubMed ID: 18624501 [TBL] [Abstract][Full Text] [Related]
2. Self-assembly of beta-sheet forming peptides into chiral fibrillar aggregates. Bellesia G; Shea JE J Chem Phys; 2007 Jun; 126(24):245104. PubMed ID: 17614592 [TBL] [Abstract][Full Text] [Related]
3. A semi-implicit solvent model for the simulation of peptides and proteins. Basdevant N; Borgis D; Ha-Duong T J Comput Chem; 2004 Jun; 25(8):1015-29. PubMed ID: 15067677 [TBL] [Abstract][Full Text] [Related]
4. Self-assembly of the beta2-microglobulin NHVTLSQ peptide using a coarse-grained protein model reveals a beta-barrel species. Song W; Wei G; Mousseau N; Derreumaux P J Phys Chem B; 2008 Apr; 112(14):4410-8. PubMed ID: 18341325 [TBL] [Abstract][Full Text] [Related]
5. Self-assembly of peptide scaffolds in biosilica formation: computer simulations of a coarse-grained model. Lenoci L; Camp PJ J Am Chem Soc; 2006 Aug; 128(31):10111-7. PubMed ID: 16881640 [TBL] [Abstract][Full Text] [Related]
6. Interactions of phospholipid bilayers with several classes of amphiphilic alpha-helical peptides: insights from coarse-grained molecular dynamics simulations. Gkeka P; Sarkisov L J Phys Chem B; 2010 Jan; 114(2):826-39. PubMed ID: 20028006 [TBL] [Abstract][Full Text] [Related]
7. Effect of beta-sheet propensity on peptide aggregation. Bellesia G; Shea JE J Chem Phys; 2009 Apr; 130(14):145103. PubMed ID: 19368476 [TBL] [Abstract][Full Text] [Related]
8. Separation of time scale and coupling in the motion governed by the coarse-grained and fine degrees of freedom in a polypeptide backbone. Murarka RK; Liwo A; Scheraga HA J Chem Phys; 2007 Oct; 127(15):155103. PubMed ID: 17949219 [TBL] [Abstract][Full Text] [Related]
9. Establishing effective simulation protocols for beta- and alpha/beta-peptides. II. Molecular mechanical (MM) model for a cyclic beta-residue. Zhu X; Koenig P; Gellman SH; Yethiraj A; Cui Q J Phys Chem B; 2008 May; 112(17):5439-48. PubMed ID: 18402479 [TBL] [Abstract][Full Text] [Related]
11. The dominant interaction between peptide and urea is electrostatic in nature: a molecular dynamics simulation study. Tobi D; Elber R; Thirumalai D Biopolymers; 2003 Mar; 68(3):359-69. PubMed ID: 12601795 [TBL] [Abstract][Full Text] [Related]
13. Sequence dependent self-assembly of beta-peptides: Insights from a coarse-grained model. Mondal J; Sung BJ; Yethiraj A J Chem Phys; 2010 Feb; 132(6):065103. PubMed ID: 20151759 [TBL] [Abstract][Full Text] [Related]
14. Lyotropic liquid crystals from designed helical beta-peptides. Pomerantz WC; Abbott NL; Gellman SH J Am Chem Soc; 2006 Jul; 128(27):8730-1. PubMed ID: 16819857 [TBL] [Abstract][Full Text] [Related]
15. Molecular dynamics simulations of polyglutamine aggregation using solvent-free multiscale coarse-grained models. Wang Y; Voth GA J Phys Chem B; 2010 Jul; 114(26):8735-43. PubMed ID: 20550147 [TBL] [Abstract][Full Text] [Related]
16. Cutoff size need not strongly influence molecular dynamics results for solvated polypeptides. Beck DA; Armen RS; Daggett V Biochemistry; 2005 Jan; 44(2):609-16. PubMed ID: 15641786 [TBL] [Abstract][Full Text] [Related]
17. Sequence-directed organization of beta-peptides in self-assembled monolayers. Mondal J; Sung BJ; Yethiraj A J Phys Chem B; 2009 Jul; 113(28):9379-85. PubMed ID: 19545127 [TBL] [Abstract][Full Text] [Related]
18. Molecular dynamics simulation study on the phase behavior of the Gay-Berne model with a terminal dipole and a flexible tail. Fukunaga H; Takimoto J; Doi M J Chem Phys; 2004 Apr; 120(16):7792-800. PubMed ID: 15267694 [TBL] [Abstract][Full Text] [Related]
19. Effects of hydrophobic and dipole-dipole interactions on the conformational transitions of a model polypeptide. Mu Y; Gao YQ J Chem Phys; 2007 Sep; 127(10):105102. PubMed ID: 17867781 [TBL] [Abstract][Full Text] [Related]
20. Inhibition of peptide aggregation by lipids: insights from coarse-grained molecular simulations. Hung A; Yarovsky I J Mol Graph Model; 2011 Feb; 29(5):597-607. PubMed ID: 21146432 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]