185 related articles for article (PubMed ID: 18664268)
1. Correlation between nucleotide composition and folding energy of coding sequences with special attention to wobble bases.
Biro JC
Theor Biol Med Model; 2008 Jul; 5():14. PubMed ID: 18664268
[TBL] [Abstract][Full Text] [Related]
2. Nucleic acid chaperons: a theory of an RNA-assisted protein folding.
Biro JC
Theor Biol Med Model; 2005 Sep; 2():35. PubMed ID: 16137324
[TBL] [Abstract][Full Text] [Related]
3. Indications that "codon boundaries" are physico-chemically defined and that protein-folding information is contained in the redundant exon bases.
Biro JC
Theor Biol Med Model; 2006 Aug; 3():28. PubMed ID: 16893453
[TBL] [Abstract][Full Text] [Related]
4. The influence of protein coding sequences on protein folding rates of all-β proteins.
Li RF; Li H
Gen Physiol Biophys; 2011 Jun; 30(2):154-61. PubMed ID: 21613670
[TBL] [Abstract][Full Text] [Related]
5. A novel intra-molecular protein-protein interaction code based on partial complementary coding of co-locating amino acids.
Biro JC
Med Hypotheses; 2006; 66(1):137-42. PubMed ID: 16168570
[TBL] [Abstract][Full Text] [Related]
6. Protein folding information in nucleic acids which is not present in the genetic code.
Biro JC
Ann N Y Acad Sci; 2006 Dec; 1091():399-411. PubMed ID: 17341631
[TBL] [Abstract][Full Text] [Related]
7. Widespread position-specific conservation of synonymous rare codons within coding sequences.
Chaney JL; Steele A; Carmichael R; Rodriguez A; Specht AT; Ngo K; Li J; Emrich S; Clark PL
PLoS Comput Biol; 2017 May; 13(5):e1005531. PubMed ID: 28475588
[TBL] [Abstract][Full Text] [Related]
8. Folding type specific secondary structure propensities of synonymous codons.
Gu W; Zhou T; Ma J; Sun X; Lu Z
IEEE Trans Nanobioscience; 2003 Sep; 2(3):150-7. PubMed ID: 15376949
[TBL] [Abstract][Full Text] [Related]
9. Natural selection and algorithmic design of mRNA.
Cohen B; Skiena S
J Comput Biol; 2003; 10(3-4):419-32. PubMed ID: 12935336
[TBL] [Abstract][Full Text] [Related]
10. Conflicting selection pressures on synonymous codon use in yeast suggest selection on mRNA secondary structures.
Stoletzki N
BMC Evol Biol; 2008 Jul; 8():224. PubMed ID: 18671878
[TBL] [Abstract][Full Text] [Related]
11. Choice of synonymous codons associated with protein folding.
Huang JT; Xing DJ; Huang W
Proteins; 2012 Aug; 80(8):2056-62. PubMed ID: 22513798
[TBL] [Abstract][Full Text] [Related]
12. Coding nucleic acids are chaperons for protein folding: a novel theory of protein folding.
Biro JC
Gene; 2013 Feb; 515(2):249-57. PubMed ID: 23266645
[TBL] [Abstract][Full Text] [Related]
13. Synonymous codon bias as a basis for novel antibiotic design: from nucleotide wobble constraint to ribosomal garrotte.
McKie JH; McKie SA
Future Med Chem; 2017 Aug; 9(12):1377-1400. PubMed ID: 28771025
[TBL] [Abstract][Full Text] [Related]
14. mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences.
Seffens W; Digby D
Nucleic Acids Res; 1999 Apr; 27(7):1578-84. PubMed ID: 10075987
[TBL] [Abstract][Full Text] [Related]
15. Statistical evidence for conserved, local secondary structure in the coding regions of eukaryotic mRNAs and pre-mRNAs.
Meyer IM; Miklós I
Nucleic Acids Res; 2005; 33(19):6338-48. PubMed ID: 16275783
[TBL] [Abstract][Full Text] [Related]
16. Codon-specific Ramachandran plots show amino acid backbone conformation depends on identity of the translated codon.
Rosenberg AA; Marx A; Bronstein AM
Nat Commun; 2022 May; 13(1):2815. PubMed ID: 35595777
[TBL] [Abstract][Full Text] [Related]
17. Sounds of silence: synonymous nucleotides as a key to biological regulation and complexity.
Shabalina SA; Spiridonov NA; Kashina A
Nucleic Acids Res; 2013 Feb; 41(4):2073-94. PubMed ID: 23293005
[TBL] [Abstract][Full Text] [Related]
18. Study on the influences of palindromes in protein coding sequences on the folding rates of peptide chains.
Li RF; Li H
Protein Pept Lett; 2010 Jul; 17(7):881-8. PubMed ID: 20205658
[TBL] [Abstract][Full Text] [Related]
19. A periodic pattern of mRNA secondary structure created by the genetic code.
Shabalina SA; Ogurtsov AY; Spiridonov NA
Nucleic Acids Res; 2006; 34(8):2428-37. PubMed ID: 16682450
[TBL] [Abstract][Full Text] [Related]
20. Widespread selection for extremely high and low levels of secondary structure in coding sequences across all domains of life.
Gebert D; Jehn J; Rosenkranz D
Open Biol; 2019 May; 9(5):190020. PubMed ID: 31138098
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]