These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

100 related articles for article (PubMed ID: 18689842)

  • 21. Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering.
    Yooseph S; Li W; Sutton G
    BMC Bioinformatics; 2008 Apr; 9():182. PubMed ID: 18402669
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Identification of coding and non-coding sequences using local Holder exponent formalism.
    Kulkarni OC; Vigneshwar R; Jayaraman VK; Kulkarni BD
    Bioinformatics; 2005 Oct; 21(20):3818-23. PubMed ID: 16118261
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Nested Containment List (NCList): a new algorithm for accelerating interval query of genome alignment and interval databases.
    Alekseyenko AV; Lee CJ
    Bioinformatics; 2007 Jun; 23(11):1386-93. PubMed ID: 17234640
    [TBL] [Abstract][Full Text] [Related]  

  • 24. GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags.
    Castrignanò T; De Meo PD; Grillo G; Liuni S; Mignone F; Talamo IG; Pesole G
    Bioinformatics; 2006 Feb; 22(4):497-9. PubMed ID: 16267081
    [TBL] [Abstract][Full Text] [Related]  

  • 25. TruSPAdes: barcode assembly of TruSeq synthetic long reads.
    Bankevich A; Pevzner PA
    Nat Methods; 2016 Mar; 13(3):248-50. PubMed ID: 26828418
    [TBL] [Abstract][Full Text] [Related]  

  • 26. SWIFT (sequence-wide investigation with Fourier transform): a software tool for identifying proteins of a given class from the unannotated genome sequence.
    D'Avenio G; Grigioni M; Orefici G; Creti R
    Bioinformatics; 2005 Jul; 21(13):2943-9. PubMed ID: 15860563
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Gene function prediction based on genomic context clustering and discriminative learning: an application to bacteriophages.
    Li J; Halgamuge SK; Kells CI; Tang SL
    BMC Bioinformatics; 2007 May; 8 Suppl 4(Suppl 4):S6. PubMed ID: 17570149
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Robust inference of positive selection from recombining coding sequences.
    Scheffler K; Martin DP; Seoighe C
    Bioinformatics; 2006 Oct; 22(20):2493-9. PubMed ID: 16895925
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Pooled assembly of marine metagenomic datasets: enriching annotation through chimerism.
    Magasin JD; Gerloff DL
    Bioinformatics; 2015 Feb; 31(3):311-7. PubMed ID: 25306399
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Evolutionary simulations to detect functional lineage-specific genes.
    Dupanloup I; Kaessmann H
    Bioinformatics; 2006 Aug; 22(15):1815-22. PubMed ID: 16766551
    [TBL] [Abstract][Full Text] [Related]  

  • 31. THOR: targeted high-throughput ortholog reconstructor.
    Bainbridge MN; Warren RL; He A; Bilenky M; Robertson AG; Jones SJ
    Bioinformatics; 2007 Oct; 23(19):2622-4. PubMed ID: 17038343
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Structure SNP (StSNP): a web server for mapping and modeling nsSNPs on protein structures with linkage to metabolic pathways.
    Uzun A; Leslin CM; Abyzov A; Ilyin V
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W384-92. PubMed ID: 17537826
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Analyses of the structural organization of unidentified open reading frames from metagenome.
    Park SH; Cheong DE; Lee JY; Han SS; Lee JH; Kim GJ
    Biochem Biophys Res Commun; 2007 May; 356(4):961-7. PubMed ID: 17400184
    [TBL] [Abstract][Full Text] [Related]  

  • 34. RBR: library-less repeat detection for ESTs.
    Malde K; Schneeberger K; Coward E; Jonassen I
    Bioinformatics; 2006 Sep; 22(18):2232-6. PubMed ID: 16837527
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Discovering and detecting transposable elements in genome sequences.
    Bergman CM; Quesneville H
    Brief Bioinform; 2007 Nov; 8(6):382-92. PubMed ID: 17932080
    [TBL] [Abstract][Full Text] [Related]  

  • 36. The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads.
    Wang Z; Hobson N; Galindo L; Zhu S; Shi D; McDill J; Yang L; Hawkins S; Neutelings G; Datla R; Lambert G; Galbraith DW; Grassa CJ; Geraldes A; Cronk QC; Cullis C; Dash PK; Kumar PA; Cloutier S; Sharpe AG; Wong GK; Wang J; Deyholos MK
    Plant J; 2012 Nov; 72(3):461-73. PubMed ID: 22757964
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Annotation confidence score for genome annotation: a genome comparison approach.
    Yang Y; Gilbert D; Kim S
    Bioinformatics; 2010 Jan; 26(1):22-9. PubMed ID: 19855104
    [TBL] [Abstract][Full Text] [Related]  

  • 38. LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources.
    Karchin R; Diekhans M; Kelly L; Thomas DJ; Pieper U; Eswar N; Haussler D; Sali A
    Bioinformatics; 2005 Jun; 21(12):2814-20. PubMed ID: 15827081
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome.
    Azam S; Thakur V; Ruperao P; Shah T; Balaji J; Amindala B; Farmer AD; Studholme DJ; May GD; Edwards D; Jones JD; Varshney RK
    Am J Bot; 2012 Feb; 99(2):186-92. PubMed ID: 22301893
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Taxonomic binning of metagenome samples generated by next-generation sequencing technologies.
    Dröge J; McHardy AC
    Brief Bioinform; 2012 Nov; 13(6):646-55. PubMed ID: 22851513
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 5.