These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
7. Protein functional annotation by homology. Mazumder R; Vasudevan S; Nikolskaya AN Methods Mol Biol; 2008; 484():465-90. PubMed ID: 18592196 [TBL] [Abstract][Full Text] [Related]
8. A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm. Podell S; Gaasterland T; Allen EE BMC Bioinformatics; 2008 Oct; 9():419. PubMed ID: 18840280 [TBL] [Abstract][Full Text] [Related]
10. TreeDomViewer: a tool for the visualization of phylogeny and protein domain structure. Alako BT; Rainey D; Nijveen H; Leunissen JA Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W104-9. PubMed ID: 16844970 [TBL] [Abstract][Full Text] [Related]
11. Homology-based modeling of 3D structures of protein-protein complexes using alignments of modified sequence profiles. Kundrotas PJ; Lensink MF; Alexov E Int J Biol Macromol; 2008 Aug; 43(2):198-208. PubMed ID: 18572239 [TBL] [Abstract][Full Text] [Related]
12. High performance GRID based implementation for genomics and protein analysis. Milanesi L; Merelli I Stud Health Technol Inform; 2006; 120():374-80. PubMed ID: 16823155 [TBL] [Abstract][Full Text] [Related]
13. Predicting functions from protein sequences--where are the bottlenecks? Bork P; Koonin EV Nat Genet; 1998 Apr; 18(4):313-8. PubMed ID: 9537411 [TBL] [Abstract][Full Text] [Related]
14. nWayComp: a genome-wide sequence comparison tool for multiple strains/species of phylogenetically related microorganisms. Yao J; Lin H; Doddapaneni H; Civerolo EL In Silico Biol; 2007; 7(2):195-200. PubMed ID: 17688445 [TBL] [Abstract][Full Text] [Related]
15. Déjà vu all over again: finding and analyzing protein structure similarities. Sierk ML; Kleywegt GJ Structure; 2004 Dec; 12(12):2103-11. PubMed ID: 15576025 [TBL] [Abstract][Full Text] [Related]
16. COPid: composition based protein identification. Kumar M; Thakur V; Raghava GP In Silico Biol; 2008; 8(2):121-8. PubMed ID: 18928200 [TBL] [Abstract][Full Text] [Related]
17. Identification of homologs in insignificant blast hits by exploiting extrinsic gene properties. Boekhorst J; Snel B BMC Bioinformatics; 2007 Sep; 8():356. PubMed ID: 17888146 [TBL] [Abstract][Full Text] [Related]
18. Mining SNPs from DNA sequence data; computational approaches to SNP discovery and analysis. van Oeveren J; Janssen A Methods Mol Biol; 2009; 578():73-91. PubMed ID: 19768587 [TBL] [Abstract][Full Text] [Related]
19. Parallelisation of the blast algorithm. Qi Y; Lin F Cell Mol Biol Lett; 2005; 10(2):281-5. PubMed ID: 16010293 [TBL] [Abstract][Full Text] [Related]
20. Efficient functional clustering of protein sequences using the Dirichlet process. Brown DP Bioinformatics; 2008 Aug; 24(16):1765-71. PubMed ID: 18511467 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]