162 related articles for article (PubMed ID: 18717551)
1. Heterocyclic diamidine interactions at AT base pairs in the DNA minor groove: effects of heterocycle differences, DNA AT sequence and length.
Liu Y; Collar CJ; Kumar A; Stephens CE; Boykin DW; Wilson WD
J Phys Chem B; 2008 Sep; 112(37):11809-18. PubMed ID: 18717551
[TBL] [Abstract][Full Text] [Related]
2. Design of DNA minor groove binding diamidines that recognize GC base pair sequences: a dimeric-hinge interaction motif.
Munde M; Ismail MA; Arafa R; Peixoto P; Collar CJ; Liu Y; Hu L; David-Cordonnier MH; Lansiaux A; Bailly C; Boykin DW; Wilson WD
J Am Chem Soc; 2007 Nov; 129(44):13732-43. PubMed ID: 17935330
[TBL] [Abstract][Full Text] [Related]
3. Thiophene-based diamidine forms a "super" at binding minor groove agent.
Mallena S; Lee MP; Bailly C; Neidle S; Kumar A; Boykin DW; Wilson WD
J Am Chem Soc; 2004 Oct; 126(42):13659-69. PubMed ID: 15493923
[TBL] [Abstract][Full Text] [Related]
4. Induced fit conformational changes of a "reversed amidine" heterocycle: optimized interactions in a DNA minor groove complex.
Munde M; Lee M; Neidle S; Arafa R; Boykin DW; Liu Y; Bailly C; Wilson WD
J Am Chem Soc; 2007 May; 129(17):5688-98. PubMed ID: 17425312
[TBL] [Abstract][Full Text] [Related]
5. A thermodynamic and structural analysis of DNA minor-groove complex formation.
Mazur S; Tanious FA; Ding D; Kumar A; Boykin DW; Simpson IJ; Neidle S; Wilson WD
J Mol Biol; 2000 Jul; 300(2):321-37. PubMed ID: 10873468
[TBL] [Abstract][Full Text] [Related]
6. Sequence and length dependent thermodynamic differences in heterocyclic diamidine interactions at AT base pairs in the DNA minor groove.
Liu Y; Kumar A; Boykin DW; Wilson WD
Biophys Chem; 2007 Dec; 131(1-3):1-14. PubMed ID: 17889984
[TBL] [Abstract][Full Text] [Related]
7. Small Sequence-Sensitive Compounds for Specific Recognition of the G⋅C Base Pair in DNA Minor Groove.
Farahat AA; Guo P; Shoeib H; Paul A; Boykin DW; Wilson WD
Chemistry; 2020 Apr; 26(20):4539-4551. PubMed ID: 31884714
[TBL] [Abstract][Full Text] [Related]
8. Drug design and DNA structural research inspired by the Neidle laboratory: DNA minor groove binding and transcription factor inhibition by thiophene diamidines.
Ogbonna EN; Paul A; Ross Terrell J; Fang Z; Chen C; Poon GMK; Boykin DW; Wilson WD
Bioorg Med Chem; 2022 Aug; 68():116861. PubMed ID: 35661929
[TBL] [Abstract][Full Text] [Related]
9. Evaluation of the influence of compound structure on stacked-dimer formation in the DNA minor groove.
Wang L; Carrasco C; Kumar A; Stephens CE; Bailly C; Boykin DW; Wilson WD
Biochemistry; 2001 Feb; 40(8):2511-21. PubMed ID: 11327873
[TBL] [Abstract][Full Text] [Related]
10. Comparative thermodynamics for monomer and dimer sequence-dependent binding of a heterocyclic dication in the DNA minor groove.
Wang L; Kumar A; Boykin DW; Bailly C; Wilson WD
J Mol Biol; 2002 Mar; 317(3):361-74. PubMed ID: 11922670
[TBL] [Abstract][Full Text] [Related]
11. A New Generation of Minor-Groove-Binding-Heterocyclic Diamidines That Recognize G·C Base Pairs in an AT Sequence Context.
Paul A; Guo P; Boykin DW; Wilson WD
Molecules; 2019 Mar; 24(5):. PubMed ID: 30866557
[TBL] [Abstract][Full Text] [Related]
12. Measurement and theory of hydrogen bonding contribution to isosteric DNA base pairs.
Khakshoor O; Wheeler SE; Houk KN; Kool ET
J Am Chem Soc; 2012 Feb; 134(6):3154-63. PubMed ID: 22300089
[TBL] [Abstract][Full Text] [Related]
13. Minor groove binding compounds that jump a gc base pair and bind to adjacent AT base pair sites.
Rahimian M; Kumar A; Say M; Bakunov SA; Boykin DW; Tidwell RR; Wilson WD
Biochemistry; 2009 Feb; 48(7):1573-83. PubMed ID: 19173620
[TBL] [Abstract][Full Text] [Related]
14. Design and synthesis of heterocyclic cations for specific DNA recognition: from AT-rich to mixed-base-pair DNA sequences.
Chai Y; Paul A; Rettig M; Wilson WD; Boykin DW
J Org Chem; 2014 Feb; 79(3):852-66. PubMed ID: 24422528
[TBL] [Abstract][Full Text] [Related]
15. DNA minor groove induced dimerization of heterocyclic cations: compound structure, binding affinity, and specificity for a TTAA site.
Munde M; Kumar A; Nhili R; Depauw S; David-Cordonnier MH; Ismail MA; Stephens CE; Farahat AA; Batista-Parra A; Boykin DW; Wilson WD
J Mol Biol; 2010 Oct; 402(5):847-64. PubMed ID: 20713062
[TBL] [Abstract][Full Text] [Related]
16. The unusual monomer recognition of guanine-containing mixed sequence DNA by a dithiophene heterocyclic diamidine.
Munde M; Kumar A; Peixoto P; Depauw S; Ismail MA; Farahat AA; Paul A; Say MV; David-Cordonnier MH; Boykin DW; Wilson WD
Biochemistry; 2014 Feb; 53(7):1218-27. PubMed ID: 24495039
[TBL] [Abstract][Full Text] [Related]
17. Binding to the DNA Minor Groove by Heterocyclic Dications: from AT Specific to GC Recognition Compounds.
Paul A; Nanjunda R; Wilson WD
Curr Protoc; 2023 Apr; 3(4):e729. PubMed ID: 37071034
[TBL] [Abstract][Full Text] [Related]
18. Shape selective recognition of T.A base pairs by hairpin polyamides containing N-terminal 3-methoxy (and 3-chloro) thiophene residues.
Foister S; Marques MA; Doss RM; Dervan PB
Bioorg Med Chem; 2003 Oct; 11(20):4333-40. PubMed ID: 13129569
[TBL] [Abstract][Full Text] [Related]
19. Thermodynamic Factors That Drive Sequence-Specific DNA Binding of Designed, Synthetic Minor Groove Binding Agents.
Paul A; Farahat AA; Boykin DW; Wilson WD
Life (Basel); 2022 May; 12(5):. PubMed ID: 35629349
[TBL] [Abstract][Full Text] [Related]
20. Water-mediated binding of agents that target the DNA minor groove.
Liu Y; Kumar A; Depauw S; Nhili R; David-Cordonnier MH; Lee MP; Ismail MA; Farahat AA; Say M; Chackal-Catoen S; Batista-Parra A; Neidle S; Boykin DW; Wilson WD
J Am Chem Soc; 2011 Jul; 133(26):10171-83. PubMed ID: 21627167
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
