122 related articles for article (PubMed ID: 18728042)
1. Improving subcellular localization prediction using text classification and the gene ontology.
Fyshe A; Liu Y; Szafron D; Greiner R; Lu P
Bioinformatics; 2008 Nov; 24(21):2512-7. PubMed ID: 18728042
[TBL] [Abstract][Full Text] [Related]
2. Automatic extraction of gene/protein biological functions from biomedical text.
Koike A; Niwa Y; Takagi T
Bioinformatics; 2005 Apr; 21(7):1227-36. PubMed ID: 15509601
[TBL] [Abstract][Full Text] [Related]
3. EpiLoc: a (working) text-based system for predicting protein subcellular location.
Brady S; Shatkay H
Pac Symp Biocomput; 2008; ():604-15. PubMed ID: 18229719
[TBL] [Abstract][Full Text] [Related]
4. Ranking Gene Ontology terms for predicting non-classical secretory proteins in eukaryotes and prokaryotes.
Huang WL
J Theor Biol; 2012 Nov; 312():105-13. PubMed ID: 22967952
[TBL] [Abstract][Full Text] [Related]
5. GoPubMed: exploring PubMed with the Gene Ontology.
Doms A; Schroeder M
Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W783-6. PubMed ID: 15980585
[TBL] [Abstract][Full Text] [Related]
6. GOASVM: a subcellular location predictor by incorporating term-frequency gene ontology into the general form of Chou's pseudo-amino acid composition.
Wan S; Mak MW; Kung SY
J Theor Biol; 2013 Apr; 323():40-8. PubMed ID: 23376577
[TBL] [Abstract][Full Text] [Related]
7. AliBaba: PubMed as a graph.
Plake C; Schiemann T; Pankalla M; Hakenberg J; Leser U
Bioinformatics; 2006 Oct; 22(19):2444-5. PubMed ID: 16870931
[TBL] [Abstract][Full Text] [Related]
8. Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction.
Lei Z; Dai Y
BMC Bioinformatics; 2006 Nov; 7():491. PubMed ID: 17090318
[TBL] [Abstract][Full Text] [Related]
9. Text mining and protein annotations: the construction and use of protein description sentences.
Krallinger M; Malik R; Valencia A
Genome Inform; 2006; 17(2):121-30. PubMed ID: 17503385
[TBL] [Abstract][Full Text] [Related]
10. Finding the evidence for protein-protein interactions from PubMed abstracts.
Jang H; Lim J; Lim JH; Park SJ; Lee KC; Park SH
Bioinformatics; 2006 Jul; 22(14):e220-6. PubMed ID: 16873475
[TBL] [Abstract][Full Text] [Related]
11. Prediction of protein subcellular localization.
Yu CS; Chen YC; Lu CH; Hwang JK
Proteins; 2006 Aug; 64(3):643-51. PubMed ID: 16752418
[TBL] [Abstract][Full Text] [Related]
12. Ranking the whole MEDLINE database according to a large training set using text indexing.
Suomela BP; Andrade MA
BMC Bioinformatics; 2005 Mar; 6():75. PubMed ID: 15790421
[TBL] [Abstract][Full Text] [Related]
13. PRIME: automatically extracted PRotein Interactions and Molecular Information databasE.
Koike A; Takagi T
In Silico Biol; 2005; 5(1):9-20. PubMed ID: 15972002
[TBL] [Abstract][Full Text] [Related]
14. Using Nearest Feature Line and Tunable Nearest Neighbor methods for prediction of protein subcellular locations.
Gao QB; Wang ZZ
Comput Biol Chem; 2005 Oct; 29(5):388-92. PubMed ID: 16213794
[TBL] [Abstract][Full Text] [Related]
15. PDQ Wizard: automated prioritization and characterization of gene and protein lists using biomedical literature.
Grimes GR; Wen TQ; Mewissen M; Baxter RM; Moodie S; Beattie JS; Ghazal P
Bioinformatics; 2006 Aug; 22(16):2055-7. PubMed ID: 16809392
[TBL] [Abstract][Full Text] [Related]
16. Gene ontology based transfer learning for protein subcellular localization.
Mei S; Fei W; Zhou S
BMC Bioinformatics; 2011 Feb; 12():44. PubMed ID: 21284890
[TBL] [Abstract][Full Text] [Related]
17. Euk-mPLoc: a fusion classifier for large-scale eukaryotic protein subcellular location prediction by incorporating multiple sites.
Chou KC; Shen HB
J Proteome Res; 2007 May; 6(5):1728-34. PubMed ID: 17397210
[TBL] [Abstract][Full Text] [Related]
18. mLASSO-Hum: A LASSO-based interpretable human-protein subcellular localization predictor.
Wan S; Mak MW; Kung SY
J Theor Biol; 2015 Oct; 382():223-34. PubMed ID: 26164062
[TBL] [Abstract][Full Text] [Related]
19. SherLoc2: a high-accuracy hybrid method for predicting subcellular localization of proteins.
Briesemeister S; Blum T; Brady S; Lam Y; Kohlbacher O; Shatkay H
J Proteome Res; 2009 Nov; 8(11):5363-6. PubMed ID: 19764776
[TBL] [Abstract][Full Text] [Related]
20. Protein function prediction using text-based features extracted from the biomedical literature: the CAFA challenge.
Wong A; Shatkay H
BMC Bioinformatics; 2013; 14 Suppl 3(Suppl 3):S14. PubMed ID: 23514326
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]