165 related articles for article (PubMed ID: 18787693)
1. Preferentially quantized linker DNA lengths in Saccharomyces cerevisiae.
Wang JP; Fondufe-Mittendorf Y; Xi L; Tsai GF; Segal E; Widom J
PLoS Comput Biol; 2008 Sep; 4(9):e1000175. PubMed ID: 18787693
[TBL] [Abstract][Full Text] [Related]
2. A relationship between the helical twist of DNA and the ordered positioning of nucleosomes in all eukaryotic cells.
Widom J
Proc Natl Acad Sci U S A; 1992 Feb; 89(3):1095-9. PubMed ID: 1736292
[TBL] [Abstract][Full Text] [Related]
3. Re-cracking the nucleosome positioning code.
Segal MR
Stat Appl Genet Mol Biol; 2008; 7(1):Article14. PubMed ID: 18454729
[TBL] [Abstract][Full Text] [Related]
4. Yeast nucleosome DNA pattern: deconvolution from genome sequences of S. cerevisiae.
Cohanim AB; Kashi Y; Trifonov EN
J Biomol Struct Dyn; 2005 Jun; 22(6):687-94. PubMed ID: 15842173
[TBL] [Abstract][Full Text] [Related]
5. Nucleosome repeat lengths and columnar chromatin structure.
Trifonov EN
J Biomol Struct Dyn; 2016 Jun; 34(6):1156-8. PubMed ID: 26208520
[TBL] [Abstract][Full Text] [Related]
6. The genome folding mechanism in yeast.
Kimura H; Shimooka Y; Nishikawa J; Miura O; Sugiyama S; Yamada S; Ohyama T
J Biochem; 2013 Aug; 154(2):137-47. PubMed ID: 23620598
[TBL] [Abstract][Full Text] [Related]
7. A chemical approach to mapping nucleosomes at base pair resolution in yeast.
Brogaard KR; Xi L; Wang JP; Widom J
Methods Enzymol; 2012; 513():315-34. PubMed ID: 22929776
[TBL] [Abstract][Full Text] [Related]
8. Nucleosome positioning and nucleosome stacking: two faces of the same coin.
Riposo J; Mozziconacci J
Mol Biosyst; 2012 Apr; 8(4):1172-8. PubMed ID: 22266567
[TBL] [Abstract][Full Text] [Related]
9. Nucleosome positioning signals in genomic DNA.
Peckham HE; Thurman RE; Fu Y; Stamatoyannopoulos JA; Noble WS; Struhl K; Weng Z
Genome Res; 2007 Aug; 17(8):1170-7. PubMed ID: 17620451
[TBL] [Abstract][Full Text] [Related]
10. Structural analysis of DNA sequence: evidence for lateral gene transfer in Thermotoga maritima.
Worning P; Jensen LJ; Nelson KE; Brunak S; Ussery DW
Nucleic Acids Res; 2000 Feb; 28(3):706-9. PubMed ID: 10637321
[TBL] [Abstract][Full Text] [Related]
11. Yeast plasmids have fewer superhelical turns than predicted by the nucleosome repeat of yeast DNA.
Dobranowska-Fishell A; Pulleyblank DE
Biochem Cell Biol; 1991; 69(2-3):170-7. PubMed ID: 2031717
[TBL] [Abstract][Full Text] [Related]
12. Genome-wide in vitro reconstitution of yeast chromatin with in vivo-like nucleosome positioning.
Krietenstein N; Wippo CJ; Lieleg C; Korber P
Methods Enzymol; 2012; 513():205-32. PubMed ID: 22929771
[TBL] [Abstract][Full Text] [Related]
13. Genome-wide mapping of nucleosomes in yeast.
Rando OJ
Methods Enzymol; 2010; 470():105-18. PubMed ID: 20946808
[TBL] [Abstract][Full Text] [Related]
14. Chromatin Endogenous Cleavage (ChEC) as a Method to Quantify Protein Interaction with Genomic DNA in Saccharomyces cerevisiae.
Babl V; Stöckl U; Tschochner H; Milkereit P; Griesenbeck J
Methods Mol Biol; 2015; 1334():219-32. PubMed ID: 26404153
[TBL] [Abstract][Full Text] [Related]
15. Measuring DNA mechanics on the genome scale.
Basu A; Bobrovnikov DG; Qureshi Z; Kayikcioglu T; Ngo TTM; Ranjan A; Eustermann S; Cieza B; Morgan MT; Hejna M; Rube HT; Hopfner KP; Wolberger C; Song JS; Ha T
Nature; 2021 Jan; 589(7842):462-467. PubMed ID: 33328628
[TBL] [Abstract][Full Text] [Related]
16. Experiments confirm the influence of genome long-range correlations on nucleosome positioning.
Vaillant C; Audit B; Arneodo A
Phys Rev Lett; 2007 Nov; 99(21):218103. PubMed ID: 18233262
[TBL] [Abstract][Full Text] [Related]
17. Nucleosome positions predicted through comparative genomics.
Ioshikhes IP; Albert I; Zanton SJ; Pugh BF
Nat Genet; 2006 Oct; 38(10):1210-5. PubMed ID: 16964265
[TBL] [Abstract][Full Text] [Related]
18. Yeast HMO1: Linker Histone Reinvented.
Panday A; Grove A
Microbiol Mol Biol Rev; 2017 Mar; 81(1):. PubMed ID: 27903656
[TBL] [Abstract][Full Text] [Related]
19. Genomic Nucleosome Organization Reconstituted with Pure Proteins.
Krietenstein N; Wal M; Watanabe S; Park B; Peterson CL; Pugh BF; Korber P
Cell; 2016 Oct; 167(3):709-721.e12. PubMed ID: 27768892
[TBL] [Abstract][Full Text] [Related]
20. Genome-wide mapping of nucleosomes in yeast using paired-end sequencing.
Cole HA; Howard BH; Clark DJ
Methods Enzymol; 2012; 513():145-68. PubMed ID: 22929768
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]