These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

258 related articles for article (PubMed ID: 18808330)

  • 1. Reconciliation with non-binary species trees.
    Vernot B; Stolzer M; Goldman A; Durand D
    J Comput Biol; 2008 Oct; 15(8):981-1006. PubMed ID: 18808330
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reconciliation with non-binary species trees.
    Vernot B; Stolzer M; Goldman A; Durand D
    Comput Syst Bioinformatics Conf; 2007; 6():441-52. PubMed ID: 17951846
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees.
    Stolzer M; Lai H; Xu M; Sathaye D; Vernot B; Durand D
    Bioinformatics; 2012 Sep; 28(18):i409-i415. PubMed ID: 22962460
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Exact Algorithms for Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees.
    Kordi M; Bansal MS
    IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1077-1090. PubMed ID: 28622673
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Algorithms: simultaneous error-correction and rooting for gene tree reconciliation and the gene duplication problem.
    Górecki P; Eulenstein O
    BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S14. PubMed ID: 22759419
    [TBL] [Abstract][Full Text] [Related]  

  • 6. On the Complexity of Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees.
    Kordi M; Bansal MS
    IEEE/ACM Trans Comput Biol Bioinform; 2017; 14(3):587-599. PubMed ID: 28055898
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Maximum likelihood models and algorithms for gene tree evolution with duplications and losses.
    Górecki P; Burleigh GJ; Eulenstein O
    BMC Bioinformatics; 2011 Feb; 12 Suppl 1(Suppl 1):S15. PubMed ID: 21342544
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A hybrid micro-macroevolutionary approach to gene tree reconstruction.
    Durand D; Halldórsson BV; Vernot B
    J Comput Biol; 2006 Mar; 13(2):320-35. PubMed ID: 16597243
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Inferring Optimal Species Trees in the Presence of Gene Duplication and Loss: Beyond Rooted Gene Trees.
    Bayzid MS
    J Comput Biol; 2023 Feb; 30(2):161-175. PubMed ID: 36251762
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models.
    Chauve C; Ponty Y; Wallner M
    J Math Biol; 2020 Apr; 80(5):1353-1388. PubMed ID: 32060618
    [TBL] [Abstract][Full Text] [Related]  

  • 11. On the impact of uncertain gene tree rooting on duplication-transfer-loss reconciliation.
    Kundu S; Bansal MS
    BMC Bioinformatics; 2018 Aug; 19(Suppl 9):290. PubMed ID: 30367593
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees.
    Wu YC; Rasmussen MD; Bansal MS; Kellis M
    Genome Res; 2014 Mar; 24(3):475-86. PubMed ID: 24310000
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Inferring duplication episodes from unrooted gene trees.
    Paszek J; Górecki P
    BMC Genomics; 2018 May; 19(Suppl 5):288. PubMed ID: 29745844
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Efficient error correction algorithms for gene tree reconciliation based on duplication, duplication and loss, and deep coalescence.
    Chaudhary R; Burleigh JG; Eulenstein O
    BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S11. PubMed ID: 22759416
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony.
    Jacox E; Chauve C; Szöllősi GJ; Ponty Y; Scornavacca C
    Bioinformatics; 2016 Jul; 32(13):2056-8. PubMed ID: 27153713
    [TBL] [Abstract][Full Text] [Related]  

  • 16. iGTP: a software package for large-scale gene tree parsimony analysis.
    Chaudhary R; Bansal MS; Wehe A; Fernández-Baca D; Eulenstein O
    BMC Bioinformatics; 2010 Nov; 11():574. PubMed ID: 21092314
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Cubic time algorithms of amalgamating gene trees and building evolutionary scenarios.
    Lyubetsky VA; Rubanov LI; Rusin LY; Gorbunov KY
    Biol Direct; 2012 Dec; 7():48. PubMed ID: 23259766
    [TBL] [Abstract][Full Text] [Related]  

  • 18. GATC: a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution.
    Noutahi E; El-Mabrouk N
    BMC Genomics; 2018 May; 19(Suppl 2):102. PubMed ID: 29764363
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Inferring optimal species trees under gene duplication and loss.
    Bayzid MS; Mirarab S; Warnow T
    Pac Symp Biocomput; 2013; ():250-61. PubMed ID: 23424130
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models.
    Bansal MS; Burleigh JG; Eulenstein O
    BMC Bioinformatics; 2010 Jan; 11 Suppl 1(Suppl 1):S42. PubMed ID: 20122216
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.