BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

239 related articles for article (PubMed ID: 18834544)

  • 1. Pol II promoter prediction using characteristic 4-mer motifs: a machine learning approach.
    Anwar F; Baker SM; Jabid T; Mehedi Hasan M; Shoyaib M; Khan H; Walshe R
    BMC Bioinformatics; 2008 Oct; 9():414. PubMed ID: 18834544
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Human pol II promoter prediction: time series descriptors and machine learning.
    Gangal R; Sharma P
    Nucleic Acids Res; 2005; 33(4):1332-6. PubMed ID: 15741185
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MicroRNA transcription start site prediction with multi-objective feature selection.
    Bhattacharyya M; Feuerbach L; Bhadra T; Lengauer T; Bandyopadhyay S
    Stat Appl Genet Mol Biol; 2012 Jan; 11(1):Article 6. PubMed ID: 22499686
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences.
    Bucher P
    J Mol Biol; 1990 Apr; 212(4):563-78. PubMed ID: 2329577
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Highly specific localization of promoter regions in large genomic sequences by PromoterInspector: a novel context analysis approach.
    Scherf M; Klingenhoff A; Werner T
    J Mol Biol; 2000 Mar; 297(3):599-606. PubMed ID: 10731414
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Recognition of prokaryotic and eukaryotic promoters using convolutional deep learning neural networks.
    Umarov RK; Solovyev VV
    PLoS One; 2017; 12(2):e0171410. PubMed ID: 28158264
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identification of TATA and TATA-less promoters in plant genomes by integrating diversity measure, GC-Skew and DNA geometric flexibility.
    Zuo YC; Li QZ
    Genomics; 2011 Feb; 97(2):112-20. PubMed ID: 21112384
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A machine learning based method for the prediction of secretory proteins using amino acid composition, their order and similarity-search.
    Garg A; Raghava GP
    In Silico Biol; 2008; 8(2):129-40. PubMed ID: 18928201
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computational analysis of plant RNA Pol-II promoters.
    Pandey SP; Krishnamachari A
    Biosystems; 2006 Jan; 83(1):38-50. PubMed ID: 16236422
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Predicting Pol II promoter sequences using transcription factor binding sites.
    Prestridge DS
    J Mol Biol; 1995 Jun; 249(5):923-32. PubMed ID: 7791218
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PlantProm: a database of plant promoter sequences.
    Shahmuradov IA; Gammerman AJ; Hancock JM; Bramley PM; Solovyev VV
    Nucleic Acids Res; 2003 Jan; 31(1):114-7. PubMed ID: 12519961
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PromFD 1.0: a computer program that predicts eukaryotic pol II promoters using strings and IMD matrices.
    Chen QK; Hertz GZ; Stormo GD
    Comput Appl Biosci; 1997 Feb; 13(1):29-35. PubMed ID: 9088706
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Identification of core promoter modules in Drosophila and their application in accurate transcription start site prediction.
    Ohler U
    Nucleic Acids Res; 2006; 34(20):5943-50. PubMed ID: 17068082
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Computational identification of eukaryotic promoters based on cascaded deep capsule neural networks.
    Zhu Y; Li F; Xiang D; Akutsu T; Song J; Jia C
    Brief Bioinform; 2021 Jul; 22(4):. PubMed ID: 33227813
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Prediction of methylated CpGs in DNA sequences using a support vector machine.
    Bhasin M; Zhang H; Reinherz EL; Reche PA
    FEBS Lett; 2005 Aug; 579(20):4302-8. PubMed ID: 16051225
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A novel method for prokaryotic promoter prediction based on DNA stability.
    Kanhere A; Bansal M
    BMC Bioinformatics; 2005 Jan; 6():1. PubMed ID: 15631638
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A pattern-based nearest neighbor search approach for promoter prediction using DNA structural profiles.
    Gan Y; Guan J; Zhou S
    Bioinformatics; 2009 Aug; 25(16):2006-12. PubMed ID: 19515962
    [TBL] [Abstract][Full Text] [Related]  

  • 18. TargetMiner: microRNA target prediction with systematic identification of tissue-specific negative examples.
    Bandyopadhyay S; Mitra R
    Bioinformatics; 2009 Oct; 25(20):2625-31. PubMed ID: 19692556
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Prediction of protein subcellular localization.
    Yu CS; Chen YC; Lu CH; Hwang JK
    Proteins; 2006 Aug; 64(3):643-51. PubMed ID: 16752418
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A machine-learning approach to combined evidence validation of genome assemblies.
    Choi JH; Kim S; Tang H; Andrews J; Gilbert DG; Colbourne JK
    Bioinformatics; 2008 Mar; 24(6):744-50. PubMed ID: 18204064
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.