These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

326 related articles for article (PubMed ID: 18842599)

  • 1. GEOmetadb: powerful alternative search engine for the Gene Expression Omnibus.
    Zhu Y; Davis S; Stephens R; Meltzer PS; Chen Y
    Bioinformatics; 2008 Dec; 24(23):2798-800. PubMed ID: 18842599
    [TBL] [Abstract][Full Text] [Related]  

  • 2. NCBI GEO: mining tens of millions of expression profiles--database and tools update.
    Barrett T; Troup DB; Wilhite SE; Ledoux P; Rudnev D; Evangelista C; Kim IF; Soboleva A; Tomashevsky M; Edgar R
    Nucleic Acids Res; 2007 Jan; 35(Database issue):D760-5. PubMed ID: 17099226
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Mining microarray data at NCBI's Gene Expression Omnibus (GEO)*.
    Barrett T; Edgar R
    Methods Mol Biol; 2006; 338():175-90. PubMed ID: 16888359
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Gene expression omnibus: microarray data storage, submission, retrieval, and analysis.
    Barrett T; Edgar R
    Methods Enzymol; 2006; 411():352-69. PubMed ID: 16939800
    [TBL] [Abstract][Full Text] [Related]  

  • 5. GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor.
    Davis S; Meltzer PS
    Bioinformatics; 2007 Jul; 23(14):1846-7. PubMed ID: 17496320
    [TBL] [Abstract][Full Text] [Related]  

  • 6. NCBI GEO: archive for high-throughput functional genomic data.
    Barrett T; Troup DB; Wilhite SE; Ledoux P; Rudnev D; Evangelista C; Kim IF; Soboleva A; Tomashevsky M; Marshall KA; Phillippy KH; Sherman PM; Muertter RN; Edgar R
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D885-90. PubMed ID: 18940857
    [TBL] [Abstract][Full Text] [Related]  

  • 7. SRAdb: query and use public next-generation sequencing data from within R.
    Zhu Y; Stephens RM; Meltzer PS; Davis SR
    BMC Bioinformatics; 2013 Jan; 14():19. PubMed ID: 23323543
    [TBL] [Abstract][Full Text] [Related]  

  • 8. GEM-TREND: a web tool for gene expression data mining toward relevant network discovery.
    Feng C; Araki M; Kunimoto R; Tamon A; Makiguchi H; Niijima S; Tsujimoto G; Okuno Y
    BMC Genomics; 2009 Sep; 10():411. PubMed ID: 19728865
    [TBL] [Abstract][Full Text] [Related]  

  • 9. compendiumdb: an R package for retrieval and storage of functional genomics data.
    Nandal UK; van Kampen AH; Moerland PD
    Bioinformatics; 2016 Sep; 32(18):2856-7. PubMed ID: 27323392
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Importing MAGE-ML format microarray data into BioConductor.
    Durinck S; Allemeersch J; Carey VJ; Moreau Y; De Moor B
    Bioinformatics; 2004 Dec; 20(18):3641-2. PubMed ID: 15256416
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The Gene Expression Omnibus Database.
    Clough E; Barrett T
    Methods Mol Biol; 2016; 1418():93-110. PubMed ID: 27008011
    [TBL] [Abstract][Full Text] [Related]  

  • 12. NCBI GEO: archive for functional genomics data sets--10 years on.
    Barrett T; Troup DB; Wilhite SE; Ledoux P; Evangelista C; Kim IF; Tomashevsky M; Marshall KA; Phillippy KH; Sherman PM; Muertter RN; Holko M; Ayanbule O; Yefanov A; Soboleva A
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D1005-10. PubMed ID: 21097893
    [TBL] [Abstract][Full Text] [Related]  

  • 13. BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis.
    Durinck S; Moreau Y; Kasprzyk A; Davis S; De Moor B; Brazma A; Huber W
    Bioinformatics; 2005 Aug; 21(16):3439-40. PubMed ID: 16082012
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CellMontage: similar expression profile search server.
    Fujibuchi W; Kiseleva L; Taniguchi T; Harada H; Horton P
    Bioinformatics; 2007 Nov; 23(22):3103-4. PubMed ID: 17895274
    [TBL] [Abstract][Full Text] [Related]  

  • 15. NCBI GEO: archive for functional genomics data sets--update.
    Barrett T; Wilhite SE; Ledoux P; Evangelista C; Kim IF; Tomashevsky M; Marshall KA; Phillippy KH; Sherman PM; Holko M; Yefanov A; Lee H; Zhang N; Robertson CL; Serova N; Davis S; Soboleva A
    Nucleic Acids Res; 2013 Jan; 41(Database issue):D991-5. PubMed ID: 23193258
    [TBL] [Abstract][Full Text] [Related]  

  • 16. shinyGEO: a web-based application for analyzing gene expression omnibus datasets.
    Dumas J; Gargano MA; Dancik GM
    Bioinformatics; 2016 Dec; 32(23):3679-3681. PubMed ID: 27503226
    [TBL] [Abstract][Full Text] [Related]  

  • 17. inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO.
    Taminau J; Steenhoff D; Coletta A; Meganck S; Lazar C; de Schaetzen V; Duque R; Molter C; Bersini H; Nowé A; Weiss Solís DY
    Bioinformatics; 2011 Nov; 27(22):3204-5. PubMed ID: 21937664
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Gene Expression Omnibus: NCBI gene expression and hybridization array data repository.
    Edgar R; Domrachev M; Lash AE
    Nucleic Acids Res; 2002 Jan; 30(1):207-10. PubMed ID: 11752295
    [TBL] [Abstract][Full Text] [Related]  

  • 19. IlluminaGUI: graphical user interface for analyzing gene expression data generated on the Illumina platform.
    Schultze JL; Eggle D
    Bioinformatics; 2007 Jun; 23(11):1431-3. PubMed ID: 17384020
    [TBL] [Abstract][Full Text] [Related]  

  • 20. NCBI GEO: mining millions of expression profiles--database and tools.
    Barrett T; Suzek TO; Troup DB; Wilhite SE; Ngau WC; Ledoux P; Rudnev D; Lash AE; Fujibuchi W; Edgar R
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D562-6. PubMed ID: 15608262
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.