551 related articles for article (PubMed ID: 18844979)
1. Pepper EST database: comprehensive in silico tool for analyzing the chili pepper (Capsicum annuum) transcriptome.
Kim HJ; Baek KH; Lee SW; Kim J; Lee BW; Cho HS; Kim WT; Choi D; Hur CG
BMC Plant Biol; 2008 Oct; 8():101. PubMed ID: 18844979
[TBL] [Abstract][Full Text] [Related]
2. Penaeus monodon gene discovery project: the generation of an EST collection and establishment of a database.
Tassanakajon A; Klinbunga S; Paunglarp N; Rimphanitchayakit V; Udomkit A; Jitrapakdee S; Sritunyalucksana K; Phongdara A; Pongsomboon S; Supungul P; Tang S; Kuphanumart K; Pichyangkura R; Lursinsap C
Gene; 2006 Dec; 384():104-12. PubMed ID: 16945489
[TBL] [Abstract][Full Text] [Related]
3. JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow.
Latorre M; Silva H; Saba J; Guziolowski C; Vizoso P; Martinez V; Maldonado J; Morales A; Caroca R; Cambiazo V; Campos-Vargas R; Gonzalez M; Orellana A; Retamales J; Meisel LA
BMC Bioinformatics; 2006 Nov; 7():513. PubMed ID: 17123449
[TBL] [Abstract][Full Text] [Related]
4. openSputnik--a database to ESTablish comparative plant genomics using unsaturated sequence collections.
Rudd S
Nucleic Acids Res; 2005 Jan; 33(Database issue):D622-7. PubMed ID: 15608275
[TBL] [Abstract][Full Text] [Related]
5. The TIGR Plant Transcript Assemblies database.
Childs KL; Hamilton JP; Zhu W; Ly E; Cheung F; Wu H; Rabinowicz PD; Town CD; Buell CR; Chan AP
Nucleic Acids Res; 2007 Jan; 35(Database issue):D846-51. PubMed ID: 17088284
[TBL] [Abstract][Full Text] [Related]
6. A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis).
Ralph SG; Chun HJ; Kolosova N; Cooper D; Oddy C; Ritland CE; Kirkpatrick R; Moore R; Barber S; Holt RA; Jones SJ; Marra MA; Douglas CJ; Ritland K; Bohlmann J
BMC Genomics; 2008 Oct; 9():484. PubMed ID: 18854048
[TBL] [Abstract][Full Text] [Related]
7. Identification and development of polymorphic EST-SSR markers by sequence alignment in pepper, Capsicum annuum (Solanaceae).
Kong Q; Zhang G; Chen W; Zhang Z; Zou X
Am J Bot; 2012 Feb; 99(2):e59-61. PubMed ID: 22282113
[TBL] [Abstract][Full Text] [Related]
8. [A new method for EST clustering].
Zhang LD; Yuan DJ; Zhang JW; Wang SP; Zhang QF
Yi Chuan Xue Bao; 2003 Feb; 30(2):147-53. PubMed ID: 12776603
[TBL] [Abstract][Full Text] [Related]
9. Gene expression profile of human bone marrow stromal cells: high-throughput expressed sequence tag sequencing analysis.
Jia L; Young MF; Powell J; Yang L; Ho NC; Hotchkiss R; Robey PG; Francomano CA
Genomics; 2002 Jan; 79(1):7-17. PubMed ID: 11827452
[TBL] [Abstract][Full Text] [Related]
10. High-throughput identification, database storage and analysis of SNPs in EST sequences.
Useche FJ; Gao G; Harafey M; Rafalski A
Genome Inform; 2001; 12():194-203. PubMed ID: 11791238
[TBL] [Abstract][Full Text] [Related]
11. The Diatom EST Database.
Maheswari U; Montsant A; Goll J; Krishnasamy S; Rajyashri KR; Patell VM; Bowler C
Nucleic Acids Res; 2005 Jan; 33(Database issue):D344-7. PubMed ID: 15608213
[TBL] [Abstract][Full Text] [Related]
12. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
Carre W; Wang X; Porter TE; Nys Y; Tang J; Bernberg E; Morgan R; Burnside J; Aggrey SE; Simon J; Cogburn LA
Physiol Genomics; 2006 May; 25(3):514-24. PubMed ID: 16554550
[TBL] [Abstract][Full Text] [Related]
13. Transcriptome analysis of Capsicum annuum varieties Mandarin and Blackcluster: assembly, annotation and molecular marker discovery.
Ahn YK; Tripathi S; Kim JH; Cho YI; Lee HE; Kim DS; Woo JG; Cho MC
Gene; 2014 Jan; 533(2):494-9. PubMed ID: 24125952
[TBL] [Abstract][Full Text] [Related]
14. De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes.
Ashrafi H; Hill T; Stoffel K; Kozik A; Yao J; Chin-Wo SR; Van Deynze A
BMC Genomics; 2012 Oct; 13():571. PubMed ID: 23110314
[TBL] [Abstract][Full Text] [Related]
15. Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses.
Küster H; Becker A; Firnhaber C; Hohnjec N; Manthey K; Perlick AM; Bekel T; Dondrup M; Henckel K; Goesmann A; Meyer F; Wipf D; Requena N; Hildebrandt U; Hampp R; Nehls U; Krajinski F; Franken P; Pühler A
Phytochemistry; 2007 Jan; 68(1):19-32. PubMed ID: 17081576
[TBL] [Abstract][Full Text] [Related]
16. Towards the understanding of the cocoa transcriptome: Production and analysis of an exhaustive dataset of ESTs of Theobroma cacao L. generated from various tissues and under various conditions.
Argout X; Fouet O; Wincker P; Gramacho K; Legavre T; Sabau X; Risterucci AM; Da Silva C; Cascardo J; Allegre M; Kuhn D; Verica J; Courtois B; Loor G; Babin R; Sounigo O; Ducamp M; Guiltinan MJ; Ruiz M; Alemanno L; Machado R; Phillips W; Schnell R; Gilmour M; Rosenquist E; Butler D; Maximova S; Lanaud C
BMC Genomics; 2008 Oct; 9():512. PubMed ID: 18973681
[TBL] [Abstract][Full Text] [Related]
17. ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs).
Liang C; Wang G; Liu L; Ji G; Fang L; Liu Y; Carter K; Webb JS; Dean JF
BMC Genomics; 2007 May; 8():134. PubMed ID: 17535431
[TBL] [Abstract][Full Text] [Related]
18. EST and microarray analyses of pathogen-responsive genes in hot pepper (Capsicum annuum L.) non-host resistance against soybean pustule pathogen (Xanthomonas axonopodis pv. glycines).
Lee S; Kim SY; Chung E; Joung YH; Pai HS; Hur CG; Choi D
Funct Integr Genomics; 2004 Jul; 4(3):196-205. PubMed ID: 14760538
[TBL] [Abstract][Full Text] [Related]
19. Annotated expressed sequence tags (ESTs) from pre-smolt Atlantic salmon (Salmo salar) in a searchable data resource.
Adzhubei AA; Vlasova AV; Hagen-Larsen H; Ruden TA; Laerdahl JK; Høyheim B
BMC Genomics; 2007 Jul; 8():209. PubMed ID: 17605782
[TBL] [Abstract][Full Text] [Related]
20. ESTree db: a tool for peach functional genomics.
Lazzari B; Caprera A; Vecchietti A; Stella A; Milanesi L; Pozzi C
BMC Bioinformatics; 2005 Dec; 6 Suppl 4(Suppl 4):S16. PubMed ID: 16351742
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]