BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

509 related articles for article (PubMed ID: 18954438)

  • 1. FUNYBASE: a FUNgal phYlogenomic dataBASE.
    Marthey S; Aguileta G; Rodolphe F; Gendrault A; Giraud T; Fournier E; Lopez-Villavicencio M; Gautier A; Lebrun MH; Chiapello H
    BMC Bioinformatics; 2008 Oct; 9():456. PubMed ID: 18954438
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Assessing the performance of single-copy genes for recovering robust phylogenies.
    Aguileta G; Marthey S; Chiapello H; Lebrun MH; Rodolphe F; Fournier E; Gendrault-Jacquemard A; Giraud T
    Syst Biol; 2008 Aug; 57(4):613-27. PubMed ID: 18709599
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Cophenetic correlation analysis as a strategy to select phylogenetically informative proteins: an example from the fungal kingdom.
    Kuramae EE; Robert V; Echavarri-Erasun C; Boekhout T
    BMC Evol Biol; 2007 Aug; 7():134. PubMed ID: 17688684
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A phylogenomic analysis of the Ascomycota.
    Robbertse B; Reeves JB; Schoch CL; Spatafora JW
    Fungal Genet Biol; 2006 Oct; 43(10):715-25. PubMed ID: 16781175
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm.
    Podell S; Gaasterland T; Allen EE
    BMC Bioinformatics; 2008 Oct; 9():419. PubMed ID: 18840280
    [TBL] [Abstract][Full Text] [Related]  

  • 6. From phylogenetics to phylogenomics: the evolutionary relationships of insect endosymbiotic gamma-Proteobacteria as a test case.
    Comas I; Moya A; González-Candelas F
    Syst Biol; 2007 Feb; 56(1):1-16. PubMed ID: 17366133
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.
    Hanekamp K; Bohnebeck U; Beszteri B; Valentin K
    Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Assessment of phylogenomic and orthology approaches for phylogenetic inference.
    Dutilh BE; van Noort V; van der Heijden RT; Boekhout T; Snel B; Huynen MA
    Bioinformatics; 2007 Apr; 23(7):815-24. PubMed ID: 17237036
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The quest for orthologs: finding the corresponding gene across genomes.
    Kuzniar A; van Ham RC; Pongor S; Leunissen JA
    Trends Genet; 2008 Nov; 24(11):539-51. PubMed ID: 18819722
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Phylogenomics reveal a robust fungal tree of life.
    Kuramae EE; Robert V; Snel B; Weiss M; Boekhout T
    FEMS Yeast Res; 2006 Dec; 6(8):1213-20. PubMed ID: 17156018
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PhyloPat: phylogenetic pattern analysis of eukaryotic genes.
    Hulsen T; de Vlieg J; Groenen PM
    BMC Bioinformatics; 2006 Sep; 7():398. PubMed ID: 16948844
    [TBL] [Abstract][Full Text] [Related]  

  • 12. OrthoDisease: a database of human disease orthologs.
    O'Brien KP; Westerlund I; Sonnhammer EL
    Hum Mutat; 2004 Aug; 24(2):112-9. PubMed ID: 15241792
    [TBL] [Abstract][Full Text] [Related]  

  • 13. CoGenT++: an extensive and extensible data environment for computational genomics.
    Goldovsky L; Janssen P; Ahrén D; Audit B; Cases I; Darzentas N; Enright AJ; López-Bigas N; Peregrin-Alvarez JM; Smith M; Tsoka S; Kunin V; Ouzounis CA
    Bioinformatics; 2005 Oct; 21(19):3806-10. PubMed ID: 16216832
    [TBL] [Abstract][Full Text] [Related]  

  • 14. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL; Ji L; Li YD
    Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
    [TBL] [Abstract][Full Text] [Related]  

  • 15. On the quality of tree-based protein classification.
    Lazareva-Ulitsky B; Diemer K; Thomas PD
    Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database.
    Dehal PS; Boore JL
    BMC Bioinformatics; 2006 Apr; 7():201. PubMed ID: 16608522
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Automatic clustering of orthologs and in-paralogs from pairwise species comparisons.
    Remm M; Storm CE; Sonnhammer EL
    J Mol Biol; 2001 Dec; 314(5):1041-52. PubMed ID: 11743721
    [TBL] [Abstract][Full Text] [Related]  

  • 18. PHOG: a database of supergenomes built from proteome complements.
    Merkeev IV; Novichkov PS; Mironov AA
    BMC Evol Biol; 2006 Jun; 6():52. PubMed ID: 16792803
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Comprehensive analysis of orthologous protein domains using the HOPS database.
    Storm CE; Sonnhammer EL
    Genome Res; 2003 Oct; 13(10):2353-62. PubMed ID: 14525933
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Fungal Phylogenomics.
    Riley R; Nagy L
    Methods Mol Biol; 2018; 1775():251-266. PubMed ID: 29876823
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 26.