458 related articles for article (PubMed ID: 18957316)
1. Prediction of the protein structural class by specific peptide frequencies.
Costantini S; Facchiano AM
Biochimie; 2009 Feb; 91(2):226-9. PubMed ID: 18957316
[TBL] [Abstract][Full Text] [Related]
2. Combining evolutionary and structural information for local protein structure prediction.
Pei J; Grishin NV
Proteins; 2004 Sep; 56(4):782-94. PubMed ID: 15281130
[TBL] [Abstract][Full Text] [Related]
3. Variable predictive model based classification algorithm for effective separation of protein structural classes.
Raghuraj R; Lakshminarayanan S
Comput Biol Chem; 2008 Aug; 32(4):302-6. PubMed ID: 18462997
[TBL] [Abstract][Full Text] [Related]
4. High-accuracy prediction of protein structural class for low-similarity sequences based on predicted secondary structure.
Zhang S; Ding S; Wang T
Biochimie; 2011 Apr; 93(4):710-4. PubMed ID: 21237245
[TBL] [Abstract][Full Text] [Related]
5. Amino acid propensities for secondary structures are influenced by the protein structural class.
Costantini S; Colonna G; Facchiano AM
Biochem Biophys Res Commun; 2006 Apr; 342(2):441-51. PubMed ID: 16487481
[TBL] [Abstract][Full Text] [Related]
6. Prediction of protein structural class using novel evolutionary collocation-based sequence representation.
Chen K; Kurgan LA; Ruan J
J Comput Chem; 2008 Jul; 29(10):1596-604. PubMed ID: 18293306
[TBL] [Abstract][Full Text] [Related]
7. Beyond the Twilight Zone: automated prediction of structural properties of proteins by recursive neural networks and remote homology information.
Mooney C; Pollastri G
Proteins; 2009 Oct; 77(1):181-90. PubMed ID: 19422056
[TBL] [Abstract][Full Text] [Related]
8. A high-accuracy protein structural class prediction algorithm using predicted secondary structural information.
Liu T; Jia C
J Theor Biol; 2010 Dec; 267(3):272-5. PubMed ID: 20831876
[TBL] [Abstract][Full Text] [Related]
9. Classifier ensembles for protein structural class prediction with varying homology.
Kedarisetti KD; Kurgan L; Dick S
Biochem Biophys Res Commun; 2006 Sep; 348(3):981-8. PubMed ID: 16904630
[TBL] [Abstract][Full Text] [Related]
10. [Prediction of protein solvent accessibility with Markov chain model].
Wang M; Li A; Wang X; Feng H
Sheng Wu Yi Xue Gong Cheng Xue Za Zhi; 2006 Oct; 23(5):1109-13. PubMed ID: 17121365
[TBL] [Abstract][Full Text] [Related]
11. Using pseudo amino acid composition and binary-tree support vector machines to predict protein structural classes.
Zhang TL; Ding YS
Amino Acids; 2007 Nov; 33(4):623-9. PubMed ID: 17308864
[TBL] [Abstract][Full Text] [Related]
12. Prediction of protein structural class for the twilight zone sequences.
Kurgan L; Chen K
Biochem Biophys Res Commun; 2007 Jun; 357(2):453-60. PubMed ID: 17433260
[TBL] [Abstract][Full Text] [Related]
13. Prediction of protein structural classes by Chou's pseudo amino acid composition: approached using continuous wavelet transform and principal component analysis.
Li ZC; Zhou XB; Dai Z; Zou XY
Amino Acids; 2009 Jul; 37(2):415-25. PubMed ID: 18726140
[TBL] [Abstract][Full Text] [Related]
14. Sequence-based protein structure prediction using a reduced state-space hidden Markov model.
Lampros C; Costas Papaloukas ; Exarchos TP; Yorgos Goletsis ; Fotiadis DI
Comput Biol Med; 2007 Sep; 37(9):1211-24. PubMed ID: 17161834
[TBL] [Abstract][Full Text] [Related]
15. The influence of gapped positions in multiple sequence alignments on secondary structure prediction methods.
Simossis VA; Heringa J
Comput Biol Chem; 2004 Dec; 28(5-6):351-66. PubMed ID: 15556476
[TBL] [Abstract][Full Text] [Related]
16. Computer prediction of allergen proteins from sequence-derived protein structural and physicochemical properties.
Cui J; Han LY; Li H; Ung CY; Tang ZQ; Zheng CJ; Cao ZW; Chen YZ
Mol Immunol; 2007 Jan; 44(4):514-20. PubMed ID: 16563508
[TBL] [Abstract][Full Text] [Related]
17. [Protein structural class prediction with binary tree-based support vector machines].
Zhang T; Ding Y
Sheng Wu Yi Xue Gong Cheng Xue Za Zhi; 2008 Aug; 25(4):921-4. PubMed ID: 18788309
[TBL] [Abstract][Full Text] [Related]
18. Variation in structural location and amino acid conservation of functional sites in protein domain families.
Pils B; Copley RR; Schultz J
BMC Bioinformatics; 2005 Aug; 6():210. PubMed ID: 16122386
[TBL] [Abstract][Full Text] [Related]
19. DOMAC: an accurate, hybrid protein domain prediction server.
Cheng J
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W354-6. PubMed ID: 17553833
[TBL] [Abstract][Full Text] [Related]
20. Graph sharpening plus graph integration: a synergy that improves protein functional classification.
Shin H; Lisewski AM; Lichtarge O
Bioinformatics; 2007 Dec; 23(23):3217-24. PubMed ID: 17977886
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
