These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 18979204)

  • 1. Informatic resources for identifying and annotating structural RNA motifs.
    George AD; Tenenbaum SA
    Mol Biotechnol; 2009 Feb; 41(2):180-93. PubMed ID: 18979204
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Web-based tools for studying RNA structure and function.
    George AD; Tenenbaum SA
    Methods Mol Biol; 2011; 703():67-86. PubMed ID: 21125484
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Computational prediction of RNA structural motifs involved in post-transcriptional regulatory processes.
    Rabani M; Kertesz M; Segal E
    Methods Mol Biol; 2011; 714():467-79. PubMed ID: 21431758
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A computational pipeline for high- throughput discovery of cis-regulatory noncoding RNA in prokaryotes.
    Yao Z; Barrick J; Weinberg Z; Neph S; Breaker R; Tompa M; Ruzzo WL
    PLoS Comput Biol; 2007 Jul; 3(7):e126. PubMed ID: 17616982
    [TBL] [Abstract][Full Text] [Related]  

  • 5. IncMD: incremental trie-based structural motif discovery algorithm.
    Badr G; Al-Turaiki I; Turcotte M; Mathkour H
    J Bioinform Comput Biol; 2014 Oct; 12(5):1450027. PubMed ID: 25362841
    [TBL] [Abstract][Full Text] [Related]  

  • 6. DotAligner: identification and clustering of RNA structure motifs.
    Smith MA; Seemann SE; Quek XC; Mattick JS
    Genome Biol; 2017 Dec; 18(1):244. PubMed ID: 29284541
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Motif models for RNA-binding proteins.
    Sasse A; Laverty KU; Hughes TR; Morris QD
    Curr Opin Struct Biol; 2018 Dec; 53():115-123. PubMed ID: 30172081
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Predicting candidate genomic sequences that correspond to synthetic functional RNA motifs.
    Laserson U; Gan HH; Schlick T
    Nucleic Acids Res; 2005; 33(18):6057-69. PubMed ID: 16254081
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computational prediction of RNA structural motifs involved in posttranscriptional regulatory processes.
    Rabani M; Kertesz M; Segal E
    Proc Natl Acad Sci U S A; 2008 Sep; 105(39):14885-90. PubMed ID: 18815376
    [TBL] [Abstract][Full Text] [Related]  

  • 10. ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data.
    Heller D; Krestel R; Ohler U; Vingron M; Marsico A
    Nucleic Acids Res; 2017 Nov; 45(19):11004-11018. PubMed ID: 28977546
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications.
    Pietrosanto M; Mattei E; Helmer-Citterich M; Ferrè F
    Nucleic Acids Res; 2016 Oct; 44(18):8600-8609. PubMed ID: 27580722
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Computational identification of functional RNA homologs in metagenomic data.
    Nawrocki EP; Eddy SR
    RNA Biol; 2013 Jul; 10(7):1170-9. PubMed ID: 23722291
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Bioinformatic tools for studying post-transcriptional gene regulation : The UAlbany TUTR collection and other informatic resources.
    Doyle F; Zaleski C; George AD; Stenson EK; Ricciardi A; Tenenbaum SA
    Methods Mol Biol; 2008; 419():39-52. PubMed ID: 18369974
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The art of editing RNA structural alignments.
    Andersen ES
    Methods Mol Biol; 2014; 1097():379-94. PubMed ID: 24639168
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Introduction to Bioinformatics Resources for Post-transcriptional Regulation of Gene Expression.
    Quattrone A; Dassi E
    Methods Mol Biol; 2016; 1358():3-28. PubMed ID: 26463374
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparative analysis of structured RNAs in S. cerevisiae indicates a multitude of different functions.
    Steigele S; Huber W; Stocsits C; Stadler PF; Nieselt K
    BMC Biol; 2007 Jun; 5():25. PubMed ID: 17577407
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome.
    Washietl S; Hofacker IL; Lukasser M; Hüttenhofer A; Stadler PF
    Nat Biotechnol; 2005 Nov; 23(11):1383-90. PubMed ID: 16273071
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SCOR: Structural Classification of RNA, version 2.0.
    Tamura M; Hendrix DK; Klosterman PS; Schimmelman NR; Brenner SE; Holbrook SR
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D182-4. PubMed ID: 14681389
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Structure-based analysis of protein-RNA interactions using the program ENTANGLE.
    Allers J; Shamoo Y
    J Mol Biol; 2001 Aug; 311(1):75-86. PubMed ID: 11469858
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Deciphering the protein-RNA recognition code: combining large-scale quantitative methods with structural biology.
    Hennig J; Sattler M
    Bioessays; 2015 Aug; 37(8):899-908. PubMed ID: 26059946
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.