These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

164 related articles for article (PubMed ID: 18989036)

  • 1. Improving strand pairing prediction through exploring folding cooperativity.
    Jeong J; Berman P; Przytycka TM
    IEEE/ACM Trans Comput Biol Bioinform; 2008; 5(4):484-91. PubMed ID: 18989036
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Prediction of strand pairing in antiparallel and parallel beta-sheets using information theory.
    Steward RE; Thornton JM
    Proteins; 2002 Aug; 48(2):178-91. PubMed ID: 12112687
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Entropy reduction effect imposed by hydrogen bond formation on protein folding cooperativity: evidence from a hydrophobic minimalist model.
    Barbosa MA; Garcia LG; Pereira de Araújo AF
    Phys Rev E Stat Nonlin Soft Matter Phys; 2005 Nov; 72(5 Pt 1):051903. PubMed ID: 16383641
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Three-stage prediction of protein beta-sheets by neural networks, alignments and graph algorithms.
    Cheng J; Baldi P
    Bioinformatics; 2005 Jun; 21 Suppl 1():i75-84. PubMed ID: 15961501
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Predicting protein folding pathways.
    Zaki MJ; Nadimpally V; Bardhan D; Bystroff C
    Bioinformatics; 2004 Aug; 20 Suppl 1():i386-93. PubMed ID: 15262824
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Heuristic algorithm for off-lattice protein folding problem.
    Chen M; Huang WQ
    J Zhejiang Univ Sci B; 2006 Jan; 7(1):7-12. PubMed ID: 16365919
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Exploring beta-sheet structure and interactions with chemical model systems.
    Nowick JS
    Acc Chem Res; 2008 Oct; 41(10):1319-30. PubMed ID: 18798654
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BCov: a method for predicting β-sheet topology using sparse inverse covariance estimation and integer programming.
    Savojardo C; Fariselli P; Martelli PL; Casadio R
    Bioinformatics; 2013 Dec; 29(24):3151-7. PubMed ID: 24064422
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A coarse-grained Langevin molecular dynamics approach to de novo protein structure prediction.
    Sasaki TN; Cetin H; Sasai M
    Biochem Biophys Res Commun; 2008 May; 369(2):500-6. PubMed ID: 18294960
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Prediction of protein structure classes with flexible neural tree.
    Bao W; Chen Y; Wang D
    Biomed Mater Eng; 2014; 24(6):3797-806. PubMed ID: 25227096
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Selecting fast-folding proteins by their rate of convergence.
    Gridnev DK; Ojeda-May P; Garcia ME
    Phys Rev E Stat Nonlin Soft Matter Phys; 2013 Jan; 87(1):012714. PubMed ID: 23410366
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Contributions of residue pairing to beta-sheet formation: conservation and covariation of amino acid residue pairs on antiparallel beta-strands.
    Mandel-Gutfreund Y; Zaremba SM; Gregoret LM
    J Mol Biol; 2001 Feb; 305(5):1145-59. PubMed ID: 11162120
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Consensus contact prediction by linear programming.
    Gao X; Bu D; Li SC; Li M; Xu J
    Comput Syst Bioinformatics Conf; 2007; 6():323-34. PubMed ID: 17951835
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Stability of cyclic beta-hairpins: asymmetric contributions from side chains of a hydrogen-bonded cross-strand residue pair.
    Russell SJ; Blandl T; Skelton NJ; Cochran AG
    J Am Chem Soc; 2003 Jan; 125(2):388-95. PubMed ID: 12517150
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Topology independent protein structural alignment.
    Dundas J; Binkowski TA; DasGupta B; Liang J
    BMC Bioinformatics; 2007 Oct; 8():388. PubMed ID: 17937816
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Studies on the rules of β-strand alignment in a protein β-sheet structure.
    Zhang L; Zhang N; Ruan JS; Zhang T
    J Theor Biol; 2011 Sep; 285(1):69-76. PubMed ID: 21745480
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Fast in silico protein folding by introduction of alternating hydrogen bond potentials.
    Wolf MG; de Leeuw SW
    Biophys J; 2008 May; 94(10):3742-7. PubMed ID: 18434590
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Prelude and Fugue, predicting local protein structure, early folding regions and structural weaknesses.
    Kwasigroch JM; Rooman M
    Bioinformatics; 2006 Jul; 22(14):1800-2. PubMed ID: 16682423
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A multi-objective evolutionary approach to the protein structure prediction problem.
    Cutello V; Narzisi G; Nicosia G
    J R Soc Interface; 2006 Feb; 3(6):139-51. PubMed ID: 16849226
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The Role of Aromatic-Aromatic Interactions in Strand-Strand Stabilization of β-Sheets.
    Budyak IL; Zhuravleva A; Gierasch LM
    J Mol Biol; 2013 Sep; 425(18):3522-35. PubMed ID: 23810905
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.