2283 related articles for article (PubMed ID: 19004872)
1. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis.
Cole JR; Wang Q; Cardenas E; Fish J; Chai B; Farris RJ; Kulam-Syed-Mohideen AS; McGarrell DM; Marsh T; Garrity GM; Tiedje JM
Nucleic Acids Res; 2009 Jan; 37(Database issue):D141-5. PubMed ID: 19004872
[TBL] [Abstract][Full Text] [Related]
2. The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy.
Cole JR; Chai B; Marsh TL; Farris RJ; Wang Q; Kulam SA; Chandra S; McGarrell DM; Schmidt TM; Garrity GM; Tiedje JM;
Nucleic Acids Res; 2003 Jan; 31(1):442-3. PubMed ID: 12520046
[TBL] [Abstract][Full Text] [Related]
3. The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis.
Cole JR; Chai B; Farris RJ; Wang Q; Kulam SA; McGarrell DM; Garrity GM; Tiedje JM
Nucleic Acids Res; 2005 Jan; 33(Database issue):D294-6. PubMed ID: 15608200
[TBL] [Abstract][Full Text] [Related]
4. The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data.
Cole JR; Chai B; Farris RJ; Wang Q; Kulam-Syed-Mohideen AS; McGarrell DM; Bandela AM; Cardenas E; Garrity GM; Tiedje JM
Nucleic Acids Res; 2007 Jan; 35(Database issue):D169-72. PubMed ID: 17090583
[TBL] [Abstract][Full Text] [Related]
5. Ribosomal Database Project: data and tools for high throughput rRNA analysis.
Cole JR; Wang Q; Fish JA; Chai B; McGarrell DM; Sun Y; Brown CT; Porras-Alfaro A; Kuske CR; Tiedje JM
Nucleic Acids Res; 2014 Jan; 42(Database issue):D633-42. PubMed ID: 24288368
[TBL] [Abstract][Full Text] [Related]
6. The European database on small subunit ribosomal RNA.
Wuyts J; Van de Peer Y; Winkelmans T; De Wachter R
Nucleic Acids Res; 2002 Jan; 30(1):183-5. PubMed ID: 11752288
[TBL] [Abstract][Full Text] [Related]
7. A new version of the RDP (Ribosomal Database Project).
Maidak BL; Cole JR; Parker CT; Garrity GM; Larsen N; Li B; Lilburn TG; McCaughey MJ; Olsen GJ; Overbeek R; Pramanik S; Schmidt TM; Tiedje JM; Woese CR
Nucleic Acids Res; 1999 Jan; 27(1):171-3. PubMed ID: 9847171
[TBL] [Abstract][Full Text] [Related]
8. The Ribosomal Database Project.
Maidak BL; Larsen N; McCaughey MJ; Overbeek R; Olsen GJ; Fogel K; Blandy J; Woese CR
Nucleic Acids Res; 1994 Sep; 22(17):3485-7. PubMed ID: 7524021
[TBL] [Abstract][Full Text] [Related]
9. The RDP-II (Ribosomal Database Project).
Maidak BL; Cole JR; Lilburn TG; Parker CT; Saxman PR; Farris RJ; Garrity GM; Olsen GJ; Schmidt TM; Tiedje JM
Nucleic Acids Res; 2001 Jan; 29(1):173-4. PubMed ID: 11125082
[TBL] [Abstract][Full Text] [Related]
10. The Ribosomal Database Project (RDP).
Maidak BL; Olsen GJ; Larsen N; Overbeek R; McCaughey MJ; Woese CR
Nucleic Acids Res; 1996 Jan; 24(1):82-5. PubMed ID: 8594608
[TBL] [Abstract][Full Text] [Related]
11. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy.
Wang Q; Garrity GM; Tiedje JM; Cole JR
Appl Environ Microbiol; 2007 Aug; 73(16):5261-7. PubMed ID: 17586664
[TBL] [Abstract][Full Text] [Related]
12. Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using ARB software package.
Kumar Y; Westram R; Kipfer P; Meier H; Ludwig W
BMC Bioinformatics; 2006 May; 7():240. PubMed ID: 16672074
[TBL] [Abstract][Full Text] [Related]
13. The RDP (Ribosomal Database Project) continues.
Maidak BL; Cole JR; Lilburn TG; Parker CT; Saxman PR; Stredwick JM; Garrity GM; Li B; Olsen GJ; Pramanik S; Schmidt TM; Tiedje JM
Nucleic Acids Res; 2000 Jan; 28(1):173-4. PubMed ID: 10592216
[TBL] [Abstract][Full Text] [Related]
14. probeBase: an online resource for rRNA-targeted oligonucleotide probes.
Loy A; Horn M; Wagner M
Nucleic Acids Res; 2003 Jan; 31(1):514-6. PubMed ID: 12520066
[TBL] [Abstract][Full Text] [Related]
15. The RDP (Ribosomal Database Project).
Maidak BL; Olsen GJ; Larsen N; Overbeek R; McCaughey MJ; Woese CR
Nucleic Acids Res; 1997 Jan; 25(1):109-11. PubMed ID: 9016515
[TBL] [Abstract][Full Text] [Related]
16. 5SRNAdb: an information resource for 5S ribosomal RNAs.
Szymanski M; Zielezinski A; Barciszewski J; Erdmann VA; Karlowski WM
Nucleic Acids Res; 2016 Jan; 44(D1):D180-3. PubMed ID: 26490961
[TBL] [Abstract][Full Text] [Related]
17. Graphical representation of ribosomal RNA probe accessibility data using ARB software package.
Kumar Y; Westram R; Behrens S; Fuchs B; Glöckner FO; Amann R; Meier H; Ludwig W
BMC Bioinformatics; 2005 Mar; 6():61. PubMed ID: 15777482
[TBL] [Abstract][Full Text] [Related]
18. Ribovore: ribosomal RNA sequence analysis for GenBank submissions and database curation.
Schäffer AA; McVeigh R; Robbertse B; Schoch CL; Johnston A; Underwood BA; Karsch-Mizrachi I; Nawrocki EP
BMC Bioinformatics; 2021 Aug; 22(1):400. PubMed ID: 34384346
[TBL] [Abstract][Full Text] [Related]
19. The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs.
Cannone JJ; Subramanian S; Schnare MN; Collett JR; D'Souza LM; Du Y; Feng B; Lin N; Madabusi LV; Müller KM; Pande N; Shang Z; Yu N; Gutell RR
BMC Bioinformatics; 2002; 3():2. PubMed ID: 11869452
[TBL] [Abstract][Full Text] [Related]
20. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools.
Quast C; Pruesse E; Yilmaz P; Gerken J; Schweer T; Yarza P; Peplies J; Glöckner FO
Nucleic Acids Res; 2013 Jan; 41(Database issue):D590-6. PubMed ID: 23193283
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
