333 related articles for article (PubMed ID: 19029539)
1. Fast and flexible simulation of DNA sequence data.
Chen GK; Marjoram P; Wall JD
Genome Res; 2009 Jan; 19(1):136-42. PubMed ID: 19029539
[TBL] [Abstract][Full Text] [Related]
2. Critical assessment of coalescent simulators in modeling recombination hotspots in genomic sequences.
Yang T; Deng HW; Niu T
BMC Bioinformatics; 2014 Jan; 15():3. PubMed ID: 24387001
[TBL] [Abstract][Full Text] [Related]
3. GENOMEPOP: a program to simulate genomes in populations.
Carvajal-Rodríguez A
BMC Bioinformatics; 2008 Apr; 9():223. PubMed ID: 18447924
[TBL] [Abstract][Full Text] [Related]
4. Fast "coalescent" simulation.
Marjoram P; Wall JD
BMC Genet; 2006 Mar; 7():16. PubMed ID: 16539698
[TBL] [Abstract][Full Text] [Related]
5. Simulating haplotype blocks in the human genome.
Posada D; Wiuf C
Bioinformatics; 2003 Jan; 19(2):289-90. PubMed ID: 12538254
[TBL] [Abstract][Full Text] [Related]
6. The Bacterial Sequential Markov Coalescent.
De Maio N; Wilson DJ
Genetics; 2017 May; 206(1):333-343. PubMed ID: 28258183
[TBL] [Abstract][Full Text] [Related]
7. A new method for modeling coalescent processes with recombination.
Wang Y; Zhou Y; Li L; Chen X; Liu Y; Ma ZM; Xu S
BMC Bioinformatics; 2014 Aug; 15(1):273. PubMed ID: 25113665
[TBL] [Abstract][Full Text] [Related]
8. fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios.
Excoffier L; Foll M
Bioinformatics; 2011 May; 27(9):1332-4. PubMed ID: 21398675
[TBL] [Abstract][Full Text] [Related]
9. An accurate sequentially Markov conditional sampling distribution for the coalescent with recombination.
Paul JS; Steinrücken M; Song YS
Genetics; 2011 Apr; 187(4):1115-28. PubMed ID: 21270390
[TBL] [Abstract][Full Text] [Related]
10. A sequential coalescent algorithm for chromosomal inversions.
Peischl S; Koch E; Guerrero RF; Kirkpatrick M
Heredity (Edinb); 2013 Sep; 111(3):200-9. PubMed ID: 23632894
[TBL] [Abstract][Full Text] [Related]
11. scrm: efficiently simulating long sequences using the approximated coalescent with recombination.
Staab PR; Zhu S; Metzler D; Lunter G
Bioinformatics; 2015 May; 31(10):1680-2. PubMed ID: 25596205
[TBL] [Abstract][Full Text] [Related]
12. Approximating the coalescent with recombination.
McVean GA; Cardin NJ
Philos Trans R Soc Lond B Biol Sci; 2005 Jul; 360(1459):1387-93. PubMed ID: 16048782
[TBL] [Abstract][Full Text] [Related]
13. Data simulation software for whole-genome association and other studies in human genetics.
Dudek SM; Motsinger AA; Velez DR; Williams SM; Ritchie MD
Pac Symp Biocomput; 2006; ():499-510. PubMed ID: 17094264
[TBL] [Abstract][Full Text] [Related]
14. Scalable linkage-disequilibrium-based selective sweep detection: a performance guide.
Alachiotis N; Pavlidis P
Gigascience; 2016; 5():7. PubMed ID: 26862394
[TBL] [Abstract][Full Text] [Related]
15. Accounting for long-range correlations in genome-wide simulations of large cohorts.
Nelson D; Kelleher J; Ragsdale AP; Moreau C; McVean G; Gravel S
PLoS Genet; 2020 May; 16(5):e1008619. PubMed ID: 32369493
[TBL] [Abstract][Full Text] [Related]
16. Topological linkage disequilibrium calculated from coalescent genealogies.
Wirtz J; Rauscher M; Wiehe T
Theor Popul Biol; 2018 Dec; 124():41-50. PubMed ID: 30243857
[TBL] [Abstract][Full Text] [Related]
17. Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations.
Bansal V; Libiger O
BMC Bioinformatics; 2015 Jan; 16():4. PubMed ID: 25592880
[TBL] [Abstract][Full Text] [Related]
18. HAPGEN2: simulation of multiple disease SNPs.
Su Z; Marchini J; Donnelly P
Bioinformatics; 2011 Aug; 27(16):2304-5. PubMed ID: 21653516
[TBL] [Abstract][Full Text] [Related]
19. DnaSP, DNA sequence polymorphism: an interactive program for estimating population genetics parameters from DNA sequence data.
Rozas J; Rozas R
Comput Appl Biosci; 1995 Dec; 11(6):621-5. PubMed ID: 8808578
[TBL] [Abstract][Full Text] [Related]
20. Imputation of missing genotypes within LD-blocks relying on the basic coalescent and beyond: consideration of population growth and structure.
Kabisch M; Hamann U; Lorenzo Bermejo J
BMC Genomics; 2017 Oct; 18(1):798. PubMed ID: 29041903
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
