BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

141 related articles for article (PubMed ID: 19052060)

  • 1. A predictive model for identifying mini-regulatory modules in the mouse genome.
    Yaragatti M; Sandler T; Ungar L
    Bioinformatics; 2009 Feb; 25(3):353-7. PubMed ID: 19052060
    [TBL] [Abstract][Full Text] [Related]  

  • 2. In silico analysis of EST and genomic sequences allowed the prediction of cis-regulatory elements for Entamoeba histolytica mRNA polyadenylation.
    Zamorano A; López-Camarillo C; Orozco E; Weber C; Guillen N; Marchat LA
    Comput Biol Chem; 2008 Aug; 32(4):256-63. PubMed ID: 18514032
    [TBL] [Abstract][Full Text] [Related]  

  • 3. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL; Ji L; Li YD
    Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Bioinformatics for the 'bench biologist': how to find regulatory regions in genomic DNA.
    Nardone J; Lee DU; Ansel KM; Rao A
    Nat Immunol; 2004 Aug; 5(8):768-74. PubMed ID: 15282556
    [TBL] [Abstract][Full Text] [Related]  

  • 5. GATA: a graphic alignment tool for comparative sequence analysis.
    Nix DA; Eisen MB
    BMC Bioinformatics; 2005 Jan; 6():9. PubMed ID: 15655071
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A concept for ab initio prediction of cis-regulatory modules.
    Ecker K; Welch L
    In Silico Biol; 2009; 9(5-6):285-306. PubMed ID: 22430433
    [TBL] [Abstract][Full Text] [Related]  

  • 7. CisView: a browser and database of cis-regulatory modules predicted in the mouse genome.
    Sharov AA; Dudekula DB; Ko MS
    DNA Res; 2006 Jun; 13(3):123-34. PubMed ID: 16980320
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data.
    Kim SY; Kim Y
    BMC Bioinformatics; 2006 Jul; 7():330. PubMed ID: 16817975
    [TBL] [Abstract][Full Text] [Related]  

  • 9. VISTA family of computational tools for comparative analysis of DNA sequences and whole genomes.
    Dubchak I; Ryaboy DV
    Methods Mol Biol; 2006; 338():69-89. PubMed ID: 16888351
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Characterization of 954 bovine full-CDS cDNA sequences.
    Harhay GP; Sonstegard TS; Keele JW; Heaton MP; Clawson ML; Snelling WM; Wiedmann RT; Van Tassell CP; Smith TP
    BMC Genomics; 2005 Nov; 6():166. PubMed ID: 16305752
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comparative genomics as a tool for gene discovery.
    Windsor AJ; Mitchell-Olds T
    Curr Opin Biotechnol; 2006 Apr; 17(2):161-7. PubMed ID: 16459073
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ECR Browser: a tool for visualizing and accessing data from comparisons of multiple vertebrate genomes.
    Ovcharenko I; Nobrega MA; Loots GG; Stubbs L
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W280-6. PubMed ID: 15215395
    [TBL] [Abstract][Full Text] [Related]  

  • 13. JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow.
    Latorre M; Silva H; Saba J; Guziolowski C; Vizoso P; Martinez V; Maldonado J; Morales A; Caroca R; Cambiazo V; Campos-Vargas R; Gonzalez M; Orellana A; Retamales J; Meisel LA
    BMC Bioinformatics; 2006 Nov; 7():513. PubMed ID: 17123449
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Condition-specific coregulation with cis-regulatory motifs and modules in the mouse genome.
    Choi D; Fang Y; Mathers WD
    Genomics; 2006 Apr; 87(4):500-8. PubMed ID: 16431075
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Clusters of regulatory signals for RNA polymerase II transcription associated with Alu family repeats and CpG islands in human promoters.
    Oei SL; Babich VS; Kazakov VI; Usmanova NM; Kropotov AV; Tomilin NV
    Genomics; 2004 May; 83(5):873-82. PubMed ID: 15081116
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A general pipeline for the development of anchor markers for comparative genomics in plants.
    Fredslund J; Madsen LH; Hougaard BK; Nielsen AM; Bertioli D; Sandal N; Stougaard J; Schauser L
    BMC Genomics; 2006 Aug; 7():207. PubMed ID: 16907970
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Numerous potentially functional but non-genic conserved sequences on human chromosome 21.
    Dermitzakis ET; Reymond A; Lyle R; Scamuffa N; Ucla C; Deutsch S; Stevenson BJ; Flegel V; Bucher P; Jongeneel CV; Antonarakis SE
    Nature; 2002 Dec; 420(6915):578-82. PubMed ID: 12466853
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Identification of alternate polyadenylation sites and analysis of their tissue distribution using EST data.
    Beaudoing E; Gautheret D
    Genome Res; 2001 Sep; 11(9):1520-6. PubMed ID: 11544195
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Sequence assembly.
    Scheibye-Alsing K; Hoffmann S; Frankel A; Jensen P; Stadler PF; Mang Y; Tommerup N; Gilchrist MJ; Nygård AB; Cirera S; Jørgensen CB; Fredholm M; Gorodkin J
    Comput Biol Chem; 2009 Apr; 33(2):121-36. PubMed ID: 19152793
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Dcode.org anthology of comparative genomic tools.
    Loots GG; Ovcharenko I
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W56-64. PubMed ID: 15980535
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.