These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

243 related articles for article (PubMed ID: 19053179)

  • 1. Conformational interconversion of the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N(2)-deoxyguanosine adduct when mismatched with deoxyadenosine in DNA.
    Huang H; Wang H; Lloyd RS; Rizzo CJ; Stone MP
    Chem Res Toxicol; 2009 Jan; 22(1):187-200. PubMed ID: 19053179
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The stereochemistry of trans-4-hydroxynonenal-derived exocyclic 1,N2-2'-deoxyguanosine adducts modulates formation of interstrand cross-links in the 5'-CpG-3' sequence.
    Huang H; Wang H; Qi N; Lloyd RS; Rizzo CJ; Stone MP
    Biochemistry; 2008 Nov; 47(44):11457-72. PubMed ID: 18847226
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Rearrangement of the (6S,8R,11S) and (6R,8S,11R) exocyclic 1,N2-deoxyguanosine adducts of trans-4-hydroxynonenal to N2-deoxyguanosine cyclic hemiacetal adducts when placed complementary to cytosine in duplex DNA.
    Huang H; Wang H; Qi N; Kozekova A; Rizzo CJ; Stone MP
    J Am Chem Soc; 2008 Aug; 130(33):10898-906. PubMed ID: 18661996
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Formation of a N2-dG:N2-dG carbinolamine DNA cross-link by the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N2-dG adduct.
    Huang H; Wang H; Kozekova A; Rizzo CJ; Stone MP
    J Am Chem Soc; 2011 Oct; 133(40):16101-10. PubMed ID: 21916419
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Replication bypass of the trans-4-Hydroxynonenal-derived (6S,8R,11S)-1,N(2)-deoxyguanosine DNA adduct by the sulfolobus solfataricus DNA polymerase IV.
    Banerjee S; Christov PP; Kozekova A; Rizzo CJ; Egli M; Stone MP
    Chem Res Toxicol; 2012 Feb; 25(2):422-35. PubMed ID: 22313351
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Orientation of the crotonaldehyde-derived N2-[3-Oxo-1(S)-methyl-propyl]-dG DNA adduct hinders interstrand cross-link formation in the 5'-CpG-3' sequence.
    Cho YJ; Wang H; Kozekov ID; Kozekova A; Kurtz AJ; Jacob J; Voehler M; Smith J; Harris TM; Rizzo CJ; Lloyd RS; Stone MP
    Chem Res Toxicol; 2006 Aug; 19(8):1019-29. PubMed ID: 16918240
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DNA cross-link induced by trans-4-hydroxynonenal.
    Huang H; Kozekov ID; Kozekova A; Wang H; Lloyd RS; Rizzo CJ; Stone MP
    Environ Mol Mutagen; 2010 Jul; 51(6):625-34. PubMed ID: 20577992
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structure of the 1,N2-ethenodeoxyguanosine adduct opposite cytosine in duplex DNA: Hoogsteen base pairing at pH 5.2.
    Shanmugam G; Kozekov ID; Guengerich FP; Rizzo CJ; Stone MP
    Chem Res Toxicol; 2008 Sep; 21(9):1795-805. PubMed ID: 18693701
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Solution structure of a trans-opened (10S)-dA adduct of (+)-(7S,8R,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a fully complementary DNA duplex: evidence for a major syn conformation.
    Pradhan P; Tirumala S; Liu X; Sayer JM; Jerina DM; Yeh HJ
    Biochemistry; 2001 May; 40(20):5870-81. PubMed ID: 11352722
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove.
    Cosman M; Hingerty BE; Luneva N; Amin S; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1996 Jul; 35(30):9850-63. PubMed ID: 8703959
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Site-specific mutagenicity of stereochemically defined 1,N2-deoxyguanosine adducts of trans-4-hydroxynonenal in mammalian cells.
    Fernandes PH; Wang H; Rizzo CJ; Lloyd RS
    Environ Mol Mutagen; 2003; 42(2):68-74. PubMed ID: 12929118
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Solution structures of aminofluorene [AF]-stacked conformers of the syn [AF]-C8-dG adduct positioned opposite dC or dA at a template-primer junction.
    Gu Z; Gorin A; Hingerty BE; Broyde S; Patel DJ
    Biochemistry; 1999 Aug; 38(33):10855-70. PubMed ID: 10451382
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Solution conformation of the (-)-trans-anti-[BP]dG adduct opposite a deletion site in a DNA duplex: intercalation of the covalently attached benzo[a]pyrene into the helix with base displacement of the modified deoxyguanosine into the minor groove.
    Feng B; Gorin A; Kolbanovskiy A; Hingerty BE; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1997 Nov; 36(45):13780-90. PubMed ID: 9374854
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Solution conformation of [AF]dG opposite a -2 deletion site in a DNA duplex: intercalation of the covalently attached aminofluorene ring into the helix with base displacement of the C8-modified syn guanine and adjacent unpaired 3'-adenine into the major groove.
    Mao B; Hingerty BE; Broyde S; Patel DJ
    Biochemistry; 1995 Dec; 34(51):16641-53. PubMed ID: 8527437
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Stereospecific formation of interstrand carbinolamine DNA cross-links by crotonaldehyde- and acetaldehyde-derived alpha-CH3-gamma-OH-1,N2-propano-2'-deoxyguanosine adducts in the 5'-CpG-3' sequence.
    Cho YJ; Wang H; Kozekov ID; Kurtz AJ; Jacob J; Voehler M; Smith J; Harris TM; Lloyd RS; Rizzo CJ; Stone MP
    Chem Res Toxicol; 2006 Feb; 19(2):195-208. PubMed ID: 16485895
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Stereospecific formation of the (R)-gamma-hydroxytrimethylene interstrand N2-dG:N2-dG cross-link arising from the gamma-OH-1,N2-propano-2'-deoxyguanosine adduct in the 5'-CpG-3' DNA sequence.
    Huang H; Kim HY; Kozekov ID; Cho YJ; Wang H; Kozekova A; Harris TM; Rizzo CJ; Stone MP
    J Am Chem Soc; 2009 Jun; 131(24):8416-24. PubMed ID: 19530727
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Structural alignment of the (+)-trans-anti-benzo[a]pyrene-dG adduct positioned opposite dC at a DNA template-primer junction.
    Feng B; Gorin A; Hingerty BE; Geacintov NE; Broyde S; Patel DJ
    Biochemistry; 1997 Nov; 36(45):13769-79. PubMed ID: 9374853
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structure of the 1,N2-etheno-2'-deoxyguanosine adduct in duplex DNA at pH 8.6.
    Shanmugam G; Goodenough AK; Kozekov ID; Guengerich FP; Rizzo CJ; Stone MP
    Chem Res Toxicol; 2007 Nov; 20(11):1601-11. PubMed ID: 17941687
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Sequence- and stereospecific conformational rearrangement of styrene oxide adducts located at A x C mismatched base pairs.
    Simeonov MF; Tamura PJ; Wilkinson AS; Harris CM; Harris TM; Stone MP
    Biochemistry; 2000 Feb; 39(5):924-37. PubMed ID: 10653636
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Mispairing of the 8,9-dihydro-8-(N7-guanyl)-9-hydroxy-aflatoxin B1 adduct with deoxyadenosine results in extrusion of the mismatched dA toward the major groove.
    Giri I; Johnston DS; Stone MP
    Biochemistry; 2002 Apr; 41(17):5462-72. PubMed ID: 11969407
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.