BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

539 related articles for article (PubMed ID: 19053531)

  • 1. Large-scale multiplexed quantitative discovery proteomics enabled by the use of an (18)O-labeled "universal" reference sample.
    Qian WJ; Liu T; Petyuk VA; Gritsenko MA; Petritis BO; Polpitiya AD; Kaushal A; Xiao W; Finnerty CC; Jeschke MG; Jaitly N; Monroe ME; Moore RJ; Moldawer LL; Davis RW; Tompkins RG; Herndon DN; Camp DG; Smith RD;
    J Proteome Res; 2009 Jan; 8(1):290-9. PubMed ID: 19053531
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Trypsin-catalyzed oxygen-18 labeling for quantitative proteomics.
    Qian WJ; Petritis BO; Nicora CD; Smith RD
    Methods Mol Biol; 2011; 753():43-54. PubMed ID: 21604114
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Plasma proteome response to severe burn injury revealed by 18O-labeled "universal" reference-based quantitative proteomics.
    Qian WJ; Petritis BO; Kaushal A; Finnerty CC; Jeschke MG; Monroe ME; Moore RJ; Schepmoes AA; Xiao W; Moldawer LL; Davis RW; Tompkins RG; Herndon DN; Camp DG; Smith RD;
    J Proteome Res; 2010 Sep; 9(9):4779-89. PubMed ID: 20698492
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Regression analysis for comparing protein samples with 16O/18O stable-isotope labeled mass spectrometry.
    Eckel-Passow JE; Oberg AL; Therneau TM; Mason CJ; Mahoney DW; Johnson KL; Olson JE; Bergen HR
    Bioinformatics; 2006 Nov; 22(22):2739-45. PubMed ID: 16954138
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The EIPeptiDi tool: enhancing peptide discovery in ICAT-based LC MS/MS experiments.
    Cannataro M; Cuda G; Gaspari M; Greco S; Tradigo G; Veltri P
    BMC Bioinformatics; 2007 Jul; 8():255. PubMed ID: 17631686
    [TBL] [Abstract][Full Text] [Related]  

  • 6. 18O stable isotope labeling in MS-based proteomics.
    Ye X; Luke B; Andresson T; Blonder J
    Brief Funct Genomic Proteomic; 2009 Mar; 8(2):136-44. PubMed ID: 19151093
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Trypsin catalyzed 16O-to-18O exchange for comparative proteomics: tandem mass spectrometry comparison using MALDI-TOF, ESI-QTOF, and ESI-ion trap mass spectrometers.
    Heller M; Mattou H; Menzel C; Yao X
    J Am Soc Mass Spectrom; 2003 Jul; 14(7):704-18. PubMed ID: 12837592
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The use of a quantitative cysteinyl-peptide enrichment technology for high-throughput quantitative proteomics.
    Liu T; Qian WJ; Camp DG; Smith RD
    Methods Mol Biol; 2007; 359():107-24. PubMed ID: 17484113
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Trypsin-mediated ¹⁸O/¹⁶O labeling for biomarker discovery.
    Ye X; Chan KC; Prieto DA; Luke BT; Johann DJ; Stockwin LH; Newton DL; Blonder J
    Methods Mol Biol; 2013; 1002():133-49. PubMed ID: 23625401
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Protocol for Standardizing High-to-Moderate Abundance Protein Biomarker Assessments Through an MRM-with-Standard-Peptides Quantitative Approach.
    Percy AJ; Yang J; Chambers AG; Mohammed Y; Miliotis T; Borchers CH
    Adv Exp Med Biol; 2016; 919():515-530. PubMed ID: 27975233
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Trypsin is the primary mechanism by which the (18)O isotopic label is lost in quantitative proteomic studies.
    Angel PM; Orlando R
    Anal Biochem; 2006 Dec; 359(1):26-34. PubMed ID: 17046705
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Global quantitative proteomic profiling through 18O-labeling in combination with MS/MS spectra analysis.
    White CA; Oey N; Emili A
    J Proteome Res; 2009 Jul; 8(7):3653-65. PubMed ID: 19400582
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A peptide-retrieval strategy enables significant improvement of quantitative performance without compromising confidence of identification.
    Tu C; Shen S; Sheng Q; Shyr Y; Qu J
    J Proteomics; 2017 Jan; 152():276-282. PubMed ID: 27903464
    [TBL] [Abstract][Full Text] [Related]  

  • 14. 18O-labeled proteome reference as global internal standards for targeted quantification by selected reaction monitoring-mass spectrometry.
    Kim JS; Fillmore TL; Liu T; Robinson E; Hossain M; Champion BL; Moore RJ; Camp DG; Smith RD; Qian WJ
    Mol Cell Proteomics; 2011 Dec; 10(12):M110.007302. PubMed ID: 21988777
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ZoomQuant: an application for the quantitation of stable isotope labeled peptides.
    Halligan BD; Slyper RY; Twigger SN; Hicks W; Olivier M; Greene AS
    J Am Soc Mass Spectrom; 2005 Mar; 16(3):302-6. PubMed ID: 15734322
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A simple peak detection and label-free quantitation algorithm for chromatography-mass spectrometry.
    Aoshima K; Takahashi K; Ikawa M; Kimura T; Fukuda M; Tanaka S; Parry HE; Fujita Y; Yoshizawa AC; Utsunomiya S; Kajihara S; Tanaka K; Oda Y
    BMC Bioinformatics; 2014 Nov; 15(1):376. PubMed ID: 25420746
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Combination of improved (18)O incorporation and multiple reaction monitoring: a universal strategy for absolute quantitative verification of serum candidate biomarkers of liver cancer.
    Zhao Y; Jia W; Sun W; Jin W; Guo L; Wei J; Ying W; Zhang Y; Xie Y; Jiang Y; He F; Qian X
    J Proteome Res; 2010 Jun; 9(6):3319-27. PubMed ID: 20420461
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Quantitative proteomics analysis of adsorbed plasma proteins classifies nanoparticles with different surface properties and size.
    Zhang H; Burnum KE; Luna ML; Petritis BO; Kim JS; Qian WJ; Moore RJ; Heredia-Langner A; Webb-Robertson BJ; Thrall BD; Camp DG; Smith RD; Pounds JG; Liu T
    Proteomics; 2011 Dec; 11(23):4569-77. PubMed ID: 21956884
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Isotope coded protein label quantification of serum proteins--comparison with the label-free LC-MS and validation using the MRM approach.
    Turtoi A; Mazzucchelli GD; De Pauw E
    Talanta; 2010 Feb; 80(4):1487-95. PubMed ID: 20082806
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Using
    Maccarrone G; Chen A; Filiou MD
    Methods Mol Biol; 2017; 1546():235-243. PubMed ID: 27896773
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 27.