These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

145 related articles for article (PubMed ID: 19072621)

  • 1. Ramachandran revisited. DFT energy surfaces of diastereomeric trialanine peptides in the gas phase and aqueous solution.
    Tsai MI; Xu Y; Dannenberg JJ
    J Phys Chem B; 2009 Jan; 113(1):309-18. PubMed ID: 19072621
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The effect of aqueous solvation upon alpha-helix formation for polyalanines.
    Salvador P; Asensio A; Dannenberg JJ
    J Phys Chem B; 2007 Jun; 111(25):7462-6. PubMed ID: 17552560
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Conformer-Specific and Diastereomer-Specific Spectroscopy of αβα Synthetic Foldamers: Ac-Ala-β
    Blodgett KN; Zhu X; Walsh PS; Sun D; Lee J; Choi SH; Zwier TS
    J Phys Chem A; 2018 Apr; 122(14):3697-3710. PubMed ID: 29558801
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Experimental conformational energy maps of proteins and peptides.
    Balaji GA; Nagendra HG; Balaji VN; Rao SN
    Proteins; 2017 Jun; 85(6):979-1001. PubMed ID: 28168743
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Single-site mutation and secondary structure stability: an isodesmic reaction approach. The case of unnatural amino acid mutagenesis Ala-->Lac.
    Cieplak AS; Sürmeli NB
    J Org Chem; 2004 May; 69(10):3250-61. PubMed ID: 15132529
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Thermodynamics and mechanism of alpha helix initiation in alanine and valine peptides.
    Tobias DJ; Brooks CL
    Biochemistry; 1991 Jun; 30(24):6059-70. PubMed ID: 2043644
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Solvation effects on alanine dipeptide: A MP2/cc-pVTZ//MP2/6-31G** study of (Phi, Psi) energy maps and conformers in the gas phase, ether, and water.
    Wang ZX; Duan Y
    J Comput Chem; 2004 Nov; 25(14):1699-716. PubMed ID: 15362127
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Amino acid conformational preferences and solvation of polar backbone atoms in peptides and proteins.
    Avbelj F
    J Mol Biol; 2000 Jul; 300(5):1335-59. PubMed ID: 10903873
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Amide I bands of terminally blocked alanine in solutions investigated by infrared spectroscopy and density functional theory calculation: hydrogen-bonding interactions and solvent effects.
    Lee ME; Lee SY; Joo SW; Cho KH
    J Phys Chem B; 2009 May; 113(19):6894-7. PubMed ID: 19374358
    [TBL] [Abstract][Full Text] [Related]  

  • 10. pH-Independence of trialanine and the effects of termini blocking in short peptides: a combined vibrational, NMR, UVCD, and molecular dynamics study.
    Toal S; Meral D; Verbaro D; Urbanc B; Schweitzer-Stenner R
    J Phys Chem B; 2013 Apr; 117(14):3689-706. PubMed ID: 23448349
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Enthalpies of hydrogen-bonds in alpha-helical peptides. An ONIOM DFT/AM1 study.
    Wieczorek R; Dannenberg JJ
    J Am Chem Soc; 2005 Oct; 127(42):14534-5. PubMed ID: 16231881
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Flexibility of "polyunsaturated fatty acid chains" and peptide backbones: A comparative ab initio study.
    Law JM; Setiadi DH; Chass GA; Csizmadia IG; Viskolcz B
    J Phys Chem A; 2005 Jan; 109(3):520-33. PubMed ID: 16833374
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Conformational changes of trialanine induced by direct interactions between alanine residues and alcohols in binary mixtures of water with glycerol and ethanol.
    Toal S; Amidi O; Schweitzer-Stenner R
    J Am Chem Soc; 2011 Aug; 133(32):12728-39. PubMed ID: 21728315
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Chiral effects on helicity studied via the energy landscape of short (D, L)-alanine peptides.
    Neelamraju S; Oakley MT; Johnston RL
    J Chem Phys; 2015 Oct; 143(16):165103. PubMed ID: 26520555
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The folding of acetyl(Ala)28NH2 and acetyl(Ala)40NH2 extended strand peptides into antiparallel β-sheets. A density functional theory study of β-sheets with β-turns.
    Ali-Torres J; Dannenberg JJ
    J Phys Chem B; 2012 Dec; 116(48):14017-22. PubMed ID: 23157432
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Density functional theory study of β-hairpins in antiparallel β-sheets, a new classification based upon H-bond topology.
    Roy D; Pohl G; Ali-Torres J; Marianski M; Dannenberg JJ
    Biochemistry; 2012 Jul; 51(27):5387-93. PubMed ID: 22731966
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Conformational manifold of alpha-aminoisobutyric acid (Aib) containing alanine-based tripeptides in aqueous solution explored by vibrational spectroscopy, electronic circular dichroism spectroscopy, and molecular dynamics simulations.
    Schweitzer-Stenner R; Gonzales W; Bourne GT; Feng JA; Marshall GR
    J Am Chem Soc; 2007 Oct; 129(43):13095-109. PubMed ID: 17918837
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Understanding the conformational behaviour of Ac-Ala-NHMe in different media. A joint NMR and DFT study.
    Cormanich RA; Bühl M; Rittner R
    Org Biomol Chem; 2015 Sep; 13(35):9206-13. PubMed ID: 26219244
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Thermodynamic origin of cis/trans isomers of a proline-containing beta-turn model dipeptide in aqueous solution: a combined variable temperature 1H-NMR, two-dimensional 1H,1H gradient enhanced nuclear Overhauser effect spectroscopy (NOESY), one-dimensional steady-state intermolecular 13C,1H NOE, and molecular dynamics study.
    Troganis A; Gerothanassis IP; Athanassiou Z; Mavromoustakos T; Hawkes GE; Sakarellos C
    Biopolymers; 2000 Jan; 53(1):72-83. PubMed ID: 10644952
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Effect of terminal achiral and chiral residues on the conformational behaviour of poly Δ(z)Phe and analysis of various interactions.
    Nandel FS; Kaur H
    Indian J Biochem Biophys; 2003 Aug; 40(4):265-73. PubMed ID: 22900319
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.