151 related articles for article (PubMed ID: 19073142)
1. Crystal structure of human adenylate kinase 4 (L171P) suggests the role of hinge region in protein domain motion.
Liu R; Xu H; Wei Z; Wang Y; Lin Y; Gong W
Biochem Biophys Res Commun; 2009 Jan; 379(1):92-7. PubMed ID: 19073142
[TBL] [Abstract][Full Text] [Related]
2. Essential dynamics sampling study of adenylate kinase: comparison to citrate synthase and implication for the hinge and shear mechanisms of domain motions.
Snow C; Qi G; Hayward S
Proteins; 2007 May; 67(2):325-37. PubMed ID: 17299745
[TBL] [Abstract][Full Text] [Related]
3. Structure of a mutant adenylate kinase ligated with an ATP-analogue showing domain closure over ATP.
Schlauderer GJ; Proba K; Schulz GE
J Mol Biol; 1996 Feb; 256(2):223-7. PubMed ID: 8594191
[TBL] [Abstract][Full Text] [Related]
4. A novel view of domain flexibility in E. coli adenylate kinase based on structural mode-coupling (15)N NMR relaxation.
Tugarinov V; Shapiro YE; Liang Z; Freed JH; Meirovitch E
J Mol Biol; 2002 Jan; 315(2):155-70. PubMed ID: 11779236
[TBL] [Abstract][Full Text] [Related]
5. A 1.8 A resolution structure of pig muscle 3-phosphoglycerate kinase with bound MgADP and 3-phosphoglycerate in open conformation: new insight into the role of the nucleotide in domain closure.
Szilágyi AN; Ghosh M; Garman E; Vas M
J Mol Biol; 2001 Feb; 306(3):499-511. PubMed ID: 11178909
[TBL] [Abstract][Full Text] [Related]
6. Apo adenylate kinase encodes its holo form: a principal component and varimax analysis.
Cukier RI
J Phys Chem B; 2009 Feb; 113(6):1662-72. PubMed ID: 19159290
[TBL] [Abstract][Full Text] [Related]
7. Dynamic coupling between the LID and NMP domain motions in the catalytic conversion of ATP and AMP to ADP by adenylate kinase.
Jana B; Adkar BV; Biswas R; Bagchi B
J Chem Phys; 2011 Jan; 134(3):035101. PubMed ID: 21261390
[TBL] [Abstract][Full Text] [Related]
8. Structural and dynamic studies on ligand-free adenylate kinase from Mycobacterium tuberculosis revealed a closed conformation that can be related to the reduced catalytic activity.
Miron S; Munier-Lehmann H; Craescu CT
Biochemistry; 2004 Jan; 43(1):67-77. PubMed ID: 14705932
[TBL] [Abstract][Full Text] [Related]
9. Domain motions and the open-to-closed conformational transition of an enzyme: a normal mode analysis of S-adenosyl-L-homocysteine hydrolase.
Wang M; Borchardt RT; Schowen RL; Kuczera K
Biochemistry; 2005 May; 44(19):7228-39. PubMed ID: 15882061
[TBL] [Abstract][Full Text] [Related]
10. Interconversion of functional motions between mesophilic and thermophilic adenylate kinases.
Daily MD; Phillips GN; Cui Q
PLoS Comput Biol; 2011 Jul; 7(7):e1002103. PubMed ID: 21779157
[TBL] [Abstract][Full Text] [Related]
11. E. coli 5'-nucleotidase undergoes a hinge-bending domain rotation resembling a ball-and-socket motion.
Knöfel T; Sträter N
J Mol Biol; 2001 May; 309(1):255-66. PubMed ID: 11491294
[TBL] [Abstract][Full Text] [Related]
12. Dynamics in Thermotoga neapolitana adenylate kinase: 15N relaxation and hydrogen-deuterium exchange studies of a hyperthermophilic enzyme highly active at 30 degrees C.
Krishnamurthy H; Munro K; Yan H; Vieille C
Biochemistry; 2009 Mar; 48(12):2723-39. PubMed ID: 19220019
[TBL] [Abstract][Full Text] [Related]
13. Molecular dynamics of apo-adenylate kinase: a distance replica exchange method for the free energy of conformational fluctuations.
Lou H; Cukier RI
J Phys Chem B; 2006 Nov; 110(47):24121-37. PubMed ID: 17125384
[TBL] [Abstract][Full Text] [Related]
14. Substrate binding modifies the hinge bending characteristics of human 3-phosphoglycerate kinase: a molecular dynamics study.
Palmai Z; Chaloin L; Lionne C; Fidy J; Perahia D; Balog E
Proteins; 2009 Nov; 77(2):319-29. PubMed ID: 19422062
[TBL] [Abstract][Full Text] [Related]
15. Swiveling domain mechanism in pyruvate phosphate dikinase.
Lim K; Read RJ; Chen CC; Tempczyk A; Wei M; Ye D; Wu C; Dunaway-Mariano D; Herzberg O
Biochemistry; 2007 Dec; 46(51):14845-53. PubMed ID: 18052212
[TBL] [Abstract][Full Text] [Related]
16. Activation energy of catalysis-related domain motion in E. coli adenylate kinase.
Shapiro YE; Meirovitch E
J Phys Chem B; 2006 Jun; 110(23):11519-24. PubMed ID: 16771428
[TBL] [Abstract][Full Text] [Related]
17. Structure and dimerization of the kinase domain from yeast Snf1, a member of the Snf1/AMPK protein family.
Nayak V; Zhao K; Wyce A; Schwartz MF; Lo WS; Berger SL; Marmorstein R
Structure; 2006 Mar; 14(3):477-85. PubMed ID: 16531232
[TBL] [Abstract][Full Text] [Related]
18. Domain closure in adenylate kinase.
Sinev MA; Sineva EV; Ittah V; Haas E
Biochemistry; 1996 May; 35(20):6425-37. PubMed ID: 8639589
[TBL] [Abstract][Full Text] [Related]
19. Molecular dynamics of apo-adenylate kinase: a principal component analysis.
Lou H; Cukier RI
J Phys Chem B; 2006 Jun; 110(25):12796-808. PubMed ID: 16800615
[TBL] [Abstract][Full Text] [Related]
20. A new type of metal-binding site in cobalt- and zinc-containing adenylate kinases isolated from sulfate-reducers Desulfovibrio gigas and Desulfovibrio desulfuricans ATCC 27774.
Gavel OY; Bursakov SA; Di Rocco G; Trincão J; Pickering IJ; George GN; Calvete JJ; Shnyrov VL; Brondino CD; Pereira AS; Lampreia J; Tavares P; Moura JJ; Moura I
J Inorg Biochem; 2008; 102(5-6):1380-95. PubMed ID: 18328566
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
