262 related articles for article (PubMed ID: 19081051)
1. Detection of functionally important regions in "hypothetical proteins" of known structure.
Nimrod G; Schushan M; Steinberg DM; Ben-Tal N
Structure; 2008 Dec; 16(12):1755-63. PubMed ID: 19081051
[TBL] [Abstract][Full Text] [Related]
2. In silico identification of functional regions in proteins.
Nimrod G; Glaser F; Steinberg D; Ben-Tal N; Pupko T
Bioinformatics; 2005 Jun; 21 Suppl 1():i328-37. PubMed ID: 15961475
[TBL] [Abstract][Full Text] [Related]
3. N-terminal N-myristoylation of proteins: prediction of substrate proteins from amino acid sequence.
Maurer-Stroh S; Eisenhaber B; Eisenhaber F
J Mol Biol; 2002 Apr; 317(4):541-57. PubMed ID: 11955008
[TBL] [Abstract][Full Text] [Related]
4. Predicting functional sites with an automated algorithm suitable for heterogeneous datasets.
La D; Livesay DR
BMC Bioinformatics; 2005 May; 6():116. PubMed ID: 15890082
[TBL] [Abstract][Full Text] [Related]
5. The ConSurf-HSSP database: the mapping of evolutionary conservation among homologs onto PDB structures.
Glaser F; Rosenberg Y; Kessel A; Pupko T; Ben-Tal N
Proteins; 2005 Feb; 58(3):610-7. PubMed ID: 15614759
[TBL] [Abstract][Full Text] [Related]
6. [Computational method for prediction of protein functional sites using specificity determinants].
Kalinina OV; Rassel RB; Rakhmaninova AB; Gel'fand MS
Mol Biol (Mosk); 2007; 41(1):151-62. PubMed ID: 17380902
[TBL] [Abstract][Full Text] [Related]
7. Protein structure mining using a structural alphabet.
Tyagi M; de Brevern AG; Srinivasan N; Offmann B
Proteins; 2008 May; 71(2):920-37. PubMed ID: 18004784
[TBL] [Abstract][Full Text] [Related]
8. PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics.
von Grotthuss M; Plewczynski D; Ginalski K; Rychlewski L; Shakhnovich EI
BMC Bioinformatics; 2006 Feb; 7():53. PubMed ID: 16460560
[TBL] [Abstract][Full Text] [Related]
9. FRalanyzer: a tool for functional analysis of fold-recognition sequence-structure alignments.
Saini HK; Fischer D
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W499-502. PubMed ID: 17537819
[TBL] [Abstract][Full Text] [Related]
10. Predicted role for the archease protein family based on structural and sequence analysis of TM1083 and MTH1598, two proteins structurally characterized through structural genomics efforts.
Canaves JM
Proteins; 2004 Jul; 56(1):19-27. PubMed ID: 15162483
[TBL] [Abstract][Full Text] [Related]
11. Protein-protein binding site prediction by local structural alignment.
Carl N; Konc J; Vehar B; Janezic D
J Chem Inf Model; 2010 Oct; 50(10):1906-13. PubMed ID: 20919700
[TBL] [Abstract][Full Text] [Related]
12. Investigation of protein functions through data-mining on integrated human transcriptome database, H-Invitational database (H-InvDB).
Yamasaki C; Koyanagi KO; Fujii Y; Itoh T; Barrero R; Tamura T; Yamaguchi-Kabata Y; Tanino M; Takeda J; Fukuchi S; Miyazaki S; Nomura N; Sugano S; Imanishi T; Gojobori T
Gene; 2005 Dec; 364():99-107. PubMed ID: 16185827
[TBL] [Abstract][Full Text] [Related]
13. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
Najmanovich R; Kurbatova N; Thornton J
Bioinformatics; 2008 Aug; 24(16):i105-11. PubMed ID: 18689810
[TBL] [Abstract][Full Text] [Related]
14. eF-seek: prediction of the functional sites of proteins by searching for similar electrostatic potential and molecular surface shape.
Kinoshita K; Murakami Y; Nakamura H
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W398-402. PubMed ID: 17567616
[TBL] [Abstract][Full Text] [Related]
15. Evaluating protein structures determined by structural genomics consortia.
Bhattacharya A; Tejero R; Montelione GT
Proteins; 2007 Mar; 66(4):778-95. PubMed ID: 17186527
[TBL] [Abstract][Full Text] [Related]
16. Analysis of molecular recognition features (MoRFs).
Mohan A; Oldfield CJ; Radivojac P; Vacic V; Cortese MS; Dunker AK; Uversky VN
J Mol Biol; 2006 Oct; 362(5):1043-59. PubMed ID: 16935303
[TBL] [Abstract][Full Text] [Related]
17. Predicting metal-binding site residues in low-resolution structural models.
Sodhi JS; Bryson K; McGuffin LJ; Ward JJ; Wernisch L; Jones DT
J Mol Biol; 2004 Sep; 342(1):307-20. PubMed ID: 15313626
[TBL] [Abstract][Full Text] [Related]
18. Docking without docking: ISEARCH--prediction of interactions using known interfaces.
Günther S; May P; Hoppe A; Frömmel C; Preissner R
Proteins; 2007 Dec; 69(4):839-44. PubMed ID: 17803236
[TBL] [Abstract][Full Text] [Related]
19. Structural and functional characterization of binding sites in metallocarboxypeptidases based on Optimal Docking Area analysis.
Fernández D; Vendrell J; Avilés FX; Fernández-Recio J
Proteins; 2007 Jul; 68(1):131-44. PubMed ID: 17407161
[TBL] [Abstract][Full Text] [Related]
20. STAR: predicting recombination sites from amino acid sequence.
Bauer DC; Bodén M; Thier R; Gillam EM
BMC Bioinformatics; 2006 Oct; 7():437. PubMed ID: 17026775
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
