212 related articles for article (PubMed ID: 19081056)
1. Computer-based redesign of a beta sandwich protein suggests that extensive negative design is not required for de novo beta sheet design.
Hu X; Wang H; Ke H; Kuhlman B
Structure; 2008 Dec; 16(12):1799-805. PubMed ID: 19081056
[TBL] [Abstract][Full Text] [Related]
2. High-resolution protein design with backbone freedom.
Harbury PB; Plecs JJ; Tidor B; Alber T; Kim PS
Science; 1998 Nov; 282(5393):1462-7. PubMed ID: 9822371
[TBL] [Abstract][Full Text] [Related]
3. Computer-based redesign of a protein folding pathway.
Nauli S; Kuhlman B; Baker D
Nat Struct Biol; 2001 Jul; 8(7):602-5. PubMed ID: 11427890
[TBL] [Abstract][Full Text] [Related]
4. Design of a novel globular protein fold with atomic-level accuracy.
Kuhlman B; Dantas G; Ireton GC; Varani G; Stoddard BL; Baker D
Science; 2003 Nov; 302(5649):1364-8. PubMed ID: 14631033
[TBL] [Abstract][Full Text] [Related]
5. High-resolution design of a protein loop.
Hu X; Wang H; Ke H; Kuhlman B
Proc Natl Acad Sci U S A; 2007 Nov; 104(45):17668-73. PubMed ID: 17971437
[TBL] [Abstract][Full Text] [Related]
6. Design of a 20-amino acid, three-stranded beta-sheet protein.
Kortemme T; Ramírez-Alvarado M; Serrano L
Science; 1998 Jul; 281(5374):253-6. PubMed ID: 9657719
[TBL] [Abstract][Full Text] [Related]
7. Computer simulations of de novo designed helical proteins.
Sikorski A; Kolinski A; Skolnick J
Biophys J; 1998 Jul; 75(1):92-105. PubMed ID: 9649370
[TBL] [Abstract][Full Text] [Related]
8. Accurate computer-based design of a new backbone conformation in the second turn of protein L.
Kuhlman B; O'Neill JW; Kim DE; Zhang KY; Baker D
J Mol Biol; 2002 Jan; 315(3):471-7. PubMed ID: 11786026
[TBL] [Abstract][Full Text] [Related]
9. De novo backbone and sequence design of an idealized alpha/beta-barrel protein: evidence of stable tertiary structure.
Offredi F; Dubail F; Kischel P; Sarinski K; Stern AS; Van de Weerdt C; Hoch JC; Prosperi C; François JM; Mayo SL; Martial JA
J Mol Biol; 2003 Jan; 325(1):163-74. PubMed ID: 12473459
[TBL] [Abstract][Full Text] [Related]
10. Boosting protein stability with the computational design of β-sheet surfaces.
Kim DN; Jacobs TM; Kuhlman B
Protein Sci; 2016 Mar; 25(3):702-10. PubMed ID: 26701383
[TBL] [Abstract][Full Text] [Related]
11. Plasticity within the obligatory folding nucleus of an immunoglobulin-like domain.
Lappalainen I; Hurley MG; Clarke J
J Mol Biol; 2008 Jan; 375(2):547-59. PubMed ID: 18022190
[TBL] [Abstract][Full Text] [Related]
12. Effects of side-chain characteristics on stability and oligomerization state of a de novo-designed model coiled-coil: 20 amino acid substitutions in position "d".
Tripet B; Wagschal K; Lavigne P; Mant CT; Hodges RS
J Mol Biol; 2000 Jul; 300(2):377-402. PubMed ID: 10873472
[TBL] [Abstract][Full Text] [Related]
13. De novo design of a non-local β-sheet protein with high stability and accuracy.
Marcos E; Chidyausiku TM; McShan AC; Evangelidis T; Nerli S; Carter L; Nivón LG; Davis A; Oberdorfer G; Tripsianes K; Sgourakis NG; Baker D
Nat Struct Mol Biol; 2018 Nov; 25(11):1028-1034. PubMed ID: 30374087
[TBL] [Abstract][Full Text] [Related]
14. Asymmetric protein design from conserved supersecondary structures.
ElGamacy M; Coles M; Lupas A
J Struct Biol; 2018 Dec; 204(3):380-387. PubMed ID: 30558718
[TBL] [Abstract][Full Text] [Related]
15. Solvent-exposed residues located in the beta-sheet modulate the stability of the tetramerization domain of p53--a structural and combinatorial approach.
Mora P; Carbajo RJ; Pineda-Lucena A; Sánchez del Pino MM; Pérez-Payá E
Proteins; 2008 Jun; 71(4):1670-85. PubMed ID: 18076077
[TBL] [Abstract][Full Text] [Related]
16. Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension.
MacDonald JT; Kabasakal BV; Godding D; Kraatz S; Henderson L; Barber J; Freemont PS; Murray JW
Proc Natl Acad Sci U S A; 2016 Sep; 113(37):10346-51. PubMed ID: 27573845
[TBL] [Abstract][Full Text] [Related]
17. Betadoublet: de novo design, synthesis, and characterization of a beta-sandwich protein.
Quinn TP; Tweedy NB; Williams RW; Richardson JS; Richardson DC
Proc Natl Acad Sci U S A; 1994 Sep; 91(19):8747-51. PubMed ID: 8090717
[TBL] [Abstract][Full Text] [Related]
18. A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins.
Dantas G; Kuhlman B; Callender D; Wong M; Baker D
J Mol Biol; 2003 Sep; 332(2):449-60. PubMed ID: 12948494
[TBL] [Abstract][Full Text] [Related]
19. Functional rapidly folding proteins from simplified amino acid sequences.
Riddle DS; Santiago JV; Bray-Hall ST; Doshi N; Grantcharova VP; Yi Q; Baker D
Nat Struct Biol; 1997 Oct; 4(10):805-9. PubMed ID: 9334745
[TBL] [Abstract][Full Text] [Related]
20. Prediction of folding mechanisms for Ig-like beta sandwich proteins based on inter-residue average distance statistics methods.
Aumpuchin P; Kikuchi T
Proteins; 2019 Feb; 87(2):120-135. PubMed ID: 30520530
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
