BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

185 related articles for article (PubMed ID: 19114081)

  • 1. Further evaluation of the utility of "sliding window" FASTA in predicting cross-reactivity with allergenic proteins.
    Cressman RF; Ladics G
    Regul Toxicol Pharmacol; 2009 Aug; 54(3 Suppl):S20-5. PubMed ID: 19114081
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparison of conventional FASTA identity searches with the 80 amino acid sliding window FASTA search for the elucidation of potential identities to known allergens.
    Ladics GS; Bannon GA; Silvanovich A; Cressman RF
    Mol Nutr Food Res; 2007 Aug; 51(8):985-98. PubMed ID: 17639511
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The use of E-scores to determine the quality of protein alignments.
    Silvanovich A; Bannon G; McClain S
    Regul Toxicol Pharmacol; 2009 Aug; 54(3 Suppl):S26-31. PubMed ID: 19245824
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Practical and predictive bioinformatics methods for the identification of potentially cross-reactive protein matches.
    Goodman RE
    Mol Nutr Food Res; 2006 Jul; 50(7):655-60. PubMed ID: 16810734
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluation of global sequence comparison and one-to-one FASTA local alignment in regulatory allergenicity assessment of transgenic proteins in food crops.
    Song P; Herman RA; Kumpatla S
    Food Chem Toxicol; 2014 Sep; 71():142-8. PubMed ID: 24953553
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The value of short amino acid sequence matches for prediction of protein allergenicity.
    Silvanovich A; Nemeth MA; Song P; Herman R; Tagliani L; Bannon GA
    Toxicol Sci; 2006 Mar; 90(1):252-8. PubMed ID: 16338955
    [TBL] [Abstract][Full Text] [Related]  

  • 7. FASTA-SWAP and FASTA-PAT: pattern database searches using combinations of aligned amino acids, and a novel scoring theory.
    Ladunga I; Wiese BA; Smith RF
    J Mol Biol; 1996 Jun; 259(4):840-54. PubMed ID: 8683587
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Allermatch, a webtool for the prediction of potential allergenicity according to current FAO/WHO Codex alimentarius guidelines.
    Fiers MW; Kleter GA; Nijland H; Peijnenburg AA; Nap JP; van Ham RC
    BMC Bioinformatics; 2004 Sep; 5():133. PubMed ID: 15373946
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Performing IgE serum testing due to bioinformatics matches in the allergenicity assessment of GM crops.
    Goodman RE
    Food Chem Toxicol; 2008 Oct; 46 Suppl 10():S24-34. PubMed ID: 18715545
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Lack of cross-reactivity between the Bacillus thuringiensis derived protein Cry1F in maize grain and dust mite Der p7 protein with human sera positive for Der p7-IgE.
    Ladics GS; Bardina L; Cressman RF; Mattsson JL; Sampson HA
    Regul Toxicol Pharmacol; 2006 Mar; 44(2):136-43. PubMed ID: 16406630
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structural relatedness of plant food allergens with specific reference to cross-reactive allergens: an in silico analysis.
    Jenkins JA; Griffiths-Jones S; Shewry PR; Breiteneder H; Mills EN
    J Allergy Clin Immunol; 2005 Jan; 115(1):163-70. PubMed ID: 15637564
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Comparative assessment of multiple criteria for the in silico prediction of cross-reactivity of proteins to known allergens.
    Mirsky HP; Cressman RF; Ladics GS
    Regul Toxicol Pharmacol; 2013 Nov; 67(2):232-9. PubMed ID: 23933007
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Bioinformatic methods for allergenicity assessment using a comprehensive allergen database.
    Hileman RE; Silvanovich A; Goodman RE; Rice EA; Holleschak G; Astwood JD; Hefle SL
    Int Arch Allergy Immunol; 2002 Aug; 128(4):280-91. PubMed ID: 12218366
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Structural insight into protein T1, the non-allergenic member of the Bet v 1 allergen family-An in silico analysis.
    Ghosh D; Gupta-Bhattacharya S
    Mol Immunol; 2008 Jan; 45(2):456-62. PubMed ID: 17658604
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Identifying food proteins with allergenic potential: evolution of approaches to safety assessment and research to provide additional tools.
    Ladics GS; Selgrade MK
    Regul Toxicol Pharmacol; 2009 Aug; 54(3 Suppl):S2-6. PubMed ID: 19028539
    [TBL] [Abstract][Full Text] [Related]  

  • 16. 1:1 FASTA update: Using the power of
    Song P; Herman R; Kumpatla S
    Toxicol Rep; 2015; 2():1145-1148. PubMed ID: 28962455
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Validation of bioinformatic approaches for predicting allergen cross reactivity.
    Herman RA; Song P
    Food Chem Toxicol; 2019 Oct; 132():110656. PubMed ID: 31279045
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Bioinformatic screening and detection of allergen cross-reactive IgE-binding epitopes.
    McClain S
    Mol Nutr Food Res; 2017 Aug; 61(8):. PubMed ID: 28191711
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Efficient recognition of protein fold at low sequence identity by conservative application of Psi-BLAST: validation.
    Stevens FJ
    J Mol Recognit; 2005; 18(2):139-49. PubMed ID: 15558595
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Pistachio vicilin, Pis v 3, is immunoglobulin E-reactive and cross-reacts with the homologous cashew allergen, Ana o 1.
    Willison LN; Tawde P; Robotham JM; Penney RM; Teuber SS; Sathe SK; Roux KH
    Clin Exp Allergy; 2008 Jul; 38(7):1229-38. PubMed ID: 18479490
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.