These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

224 related articles for article (PubMed ID: 19122140)

  • 1. Low-barrier hydrogen bond in photoactive yellow protein.
    Yamaguchi S; Kamikubo H; Kurihara K; Kuroki R; Niimura N; Shimizu N; Yamazaki Y; Kataoka M
    Proc Natl Acad Sci U S A; 2009 Jan; 106(2):440-4. PubMed ID: 19122140
    [TBL] [Abstract][Full Text] [Related]  

  • 2. H atom positions and nuclear magnetic resonance chemical shifts of short H bonds in photoactive yellow protein.
    Saito K; Ishikita H
    Biochemistry; 2012 Feb; 51(6):1171-7. PubMed ID: 22263543
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Are there really low-barrier hydrogen bonds in proteins? The case of photoactive yellow protein.
    Nadal-Ferret M; Gelabert R; Moreno M; Lluch JM
    J Am Chem Soc; 2014 Mar; 136(9):3542-52. PubMed ID: 24548066
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Visualization of H atoms in the X-ray crystal structure of photoactive yellow protein: Does it contain low-barrier hydrogen bonds?
    Wang J
    Protein Sci; 2019 Nov; 28(11):1966-1972. PubMed ID: 31441173
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Neutron crystallography of photoactive yellow protein reveals unusual protonation state of Arg52 in the crystal.
    Yonezawa K; Shimizu N; Kurihara K; Yamazaki Y; Kamikubo H; Kataoka M
    Sci Rep; 2017 Aug; 7(1):9361. PubMed ID: 28839266
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The Low Barrier Hydrogen Bond in the Photoactive Yellow Protein: A Vacuum Artifact Absent in the Crystal and Solution.
    Graen T; Inhester L; Clemens M; Grubmüller H; Groenhof G
    J Am Chem Soc; 2016 Dec; 138(51):16620-16631. PubMed ID: 27966904
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Protonation Equilibrium in the Active Site of the Photoactive Yellow Protein.
    Campomanes P; Vanni S
    Molecules; 2021 Apr; 26(7):. PubMed ID: 33918211
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Energetics of short hydrogen bonds in photoactive yellow protein.
    Saito K; Ishikita H
    Proc Natl Acad Sci U S A; 2012 Jan; 109(1):167-72. PubMed ID: 22173632
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Strong hydrogen bond between glutamic acid 46 and chromophore leads to the intermediate spectral form and excited state proton transfer in the Y42F mutant of the photoreceptor photoactive yellow protein.
    Joshi CP; Otto H; Hoersch D; Meyer TE; Cusanovich MA; Heyn MP
    Biochemistry; 2009 Oct; 48(42):9980-93. PubMed ID: 19764818
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Short hydrogen bonds and negative charge in photoactive yellow protein promote fast isomerization but not high quantum yield.
    Zhu J; Vreede J; Hospes M; Arents J; Kennis JT; van Stokkum IH; Hellingwerf KJ; Groot ML
    J Phys Chem B; 2015 Feb; 119(6):2372-83. PubMed ID: 25144816
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Hydrogen bonding controls excited-state decay of the photoactive yellow protein chromophore.
    Boggio-Pasqua M; Robb MA; Groenhof G
    J Am Chem Soc; 2009 Sep; 131(38):13580-1. PubMed ID: 19728705
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Molecular dynamics simulations of photoactive yellow protein (PYP) in three states of its photocycle: a comparison with X-ray and NMR data and analysis of the effects of Glu46 deprotonation and mutation.
    Antes I; Thiel W; van Gunsteren WF
    Eur Biophys J; 2002 Dec; 31(7):504-20. PubMed ID: 12451420
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Short hydrogen bonds in photoactive yellow protein.
    Anderson S; Crosson S; Moffat K
    Acta Crystallogr D Biol Crystallogr; 2004 Jun; 60(Pt 6):1008-16. PubMed ID: 15159559
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Protonation of the chromophore in the photoactive yellow protein.
    Leenders EJ; Guidoni L; Röthlisberger U; Vreede J; Bolhuis PG; Meijer EJ
    J Phys Chem B; 2007 Apr; 111(14):3765-73. PubMed ID: 17388542
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Formation of an unusually short hydrogen bond in photoactive yellow protein.
    Saito K; Ishikita H
    Biochim Biophys Acta; 2013 Mar; 1827(3):387-94. PubMed ID: 23201477
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Perturbation of Short Hydrogen Bonds in Photoactive Yellow Protein via Noncanonical Amino Acid Incorporation.
    Thomson B; Both J; Wu Y; Parrish RM; Martínez TJ; Boxer SG
    J Phys Chem B; 2019 Jun; 123(23):4844-4849. PubMed ID: 31117606
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Ultrafast hydrogen-bonding dynamics in the electronic excited state of photoactive yellow protein revealed by femtosecond stimulated Raman spectroscopy.
    Nakamura R; Hamada N; Abe K; Yoshizawa M
    J Phys Chem B; 2012 Dec; 116(51):14768-75. PubMed ID: 23210980
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Preparation of large crystals of photoactive yellow protein for neutron diffraction and high resolution crystal structure analysis.
    Yamaguchi S; Kamikubo H; Shimizu N; Yamazaki Y; Imamoto Y; Kataoka M
    Photochem Photobiol; 2007; 83(2):336-8. PubMed ID: 17052135
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Low barrier hydrogen bonds in protein structure and function.
    Kemp MT; Lewandowski EM; Chen Y
    Biochim Biophys Acta Proteins Proteom; 2021 Jan; 1869(1):140557. PubMed ID: 33148530
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Communication maps of vibrational energy transport through Photoactive Yellow Protein.
    Xu Y; Leitner DM
    J Phys Chem A; 2014 Sep; 118(35):7280-7. PubMed ID: 24552496
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.