These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
86 related articles for article (PubMed ID: 19136365)
1. Stabbing balls and simplifying proteins. Daescu O; Luo J Int J Bioinform Res Appl; 2009; 5(1):64-80. PubMed ID: 19136365 [TBL] [Abstract][Full Text] [Related]
2. pKNOT: the protein KNOT web server. Lai YL; Yen SC; Yu SH; Hwang JK Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W420-4. PubMed ID: 17526524 [TBL] [Abstract][Full Text] [Related]
3. Patch Finder Plus (PFplus): a web server for extracting and displaying positive electrostatic patches on protein surfaces. Shazman S; Celniker G; Haber O; Glaser F; Mandel-Gutfreund Y Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W526-30. PubMed ID: 17537808 [TBL] [Abstract][Full Text] [Related]
4. Protein knot server: detection of knots in protein structures. Kolesov G; Virnau P; Kardar M; Mirny LA Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W425-8. PubMed ID: 17517776 [TBL] [Abstract][Full Text] [Related]
5. PDB@: an offline toolkit for exploration and analysis of PDB files. Mani U; Ravisankar S; Ramakrishnan SM J Struct Funct Genomics; 2013 Dec; 14(4):127-33. PubMed ID: 23982150 [TBL] [Abstract][Full Text] [Related]
6. PepBuild: a web server for building structure data of peptides/proteins. Singh B Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W559-61. PubMed ID: 15215449 [TBL] [Abstract][Full Text] [Related]
7. PDB explorer -- a web based algorithm for protein annotation viewer and 3D visualization. Nayarisseri A; Shardiwal RK; Yadav M; Kanungo N; Singh P; Shah P; Ahmed S Interdiscip Sci; 2014 Dec; 6(4):279-84. PubMed ID: 25118648 [TBL] [Abstract][Full Text] [Related]
8. The visualCMAT: A web-server to select and interpret correlated mutations/co-evolving residues in protein families. Suplatov D; Sharapova Y; Timonina D; Kopylov K; Švedas V J Bioinform Comput Biol; 2018 Apr; 16(2):1840005. PubMed ID: 29361894 [TBL] [Abstract][Full Text] [Related]
9. eF-seek: prediction of the functional sites of proteins by searching for similar electrostatic potential and molecular surface shape. Kinoshita K; Murakami Y; Nakamura H Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W398-402. PubMed ID: 17567616 [TBL] [Abstract][Full Text] [Related]
10. The LabelHash server and tools for substructure-based functional annotation. Moll M; Bryant DH; Kavraki LE Bioinformatics; 2011 Aug; 27(15):2161-2. PubMed ID: 21659320 [TBL] [Abstract][Full Text] [Related]
11. WEBnm@: a web application for normal mode analyses of proteins. Hollup SM; Salensminde G; Reuter N BMC Bioinformatics; 2005 Mar; 6():52. PubMed ID: 15762993 [TBL] [Abstract][Full Text] [Related]
13. FATCAT: a web server for flexible structure comparison and structure similarity searching. Ye Y; Godzik A Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W582-5. PubMed ID: 15215455 [TBL] [Abstract][Full Text] [Related]
14. PDB Goodies--a web-based GUI to manipulate the Protein Data Bank file. Hussain AS; Shanthi V; Sheik SS; Jeyakanthan J; Selvarani P; Sekar K Acta Crystallogr D Biol Crystallogr; 2002 Aug; 58(Pt 8):1385-6. PubMed ID: 12136164 [TBL] [Abstract][Full Text] [Related]
15. ProtSweep, 2Dsweep and DomainSweep: protein analysis suite at DKFZ. del Val C; Ernst P; Falkenhahn M; Fladerer C; Glatting KH; Suhai S; Hotz-Wagenblatt A Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W444-50. PubMed ID: 17526514 [TBL] [Abstract][Full Text] [Related]
16. Real time structural search of the Protein Data Bank. Guzenko D; Burley SK; Duarte JM PLoS Comput Biol; 2020 Jul; 16(7):e1007970. PubMed ID: 32639954 [TBL] [Abstract][Full Text] [Related]
17. PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence. Li ZR; Lin HH; Han LY; Jiang L; Chen X; Chen YZ Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W32-7. PubMed ID: 16845018 [TBL] [Abstract][Full Text] [Related]