These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

168 related articles for article (PubMed ID: 19186118)

  • 1. Native topology of the designed protein Top7 is not conducive to cooperative folding.
    Zhang Z; Chan HS
    Biophys J; 2009 Feb; 96(3):L25-7. PubMed ID: 19186118
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Competition between native topology and nonnative interactions in simple and complex folding kinetics of natural and designed proteins.
    Zhang Z; Chan HS
    Proc Natl Acad Sci U S A; 2010 Feb; 107(7):2920-5. PubMed ID: 20133730
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Designing cooperativity into the designed protein Top7.
    Yadahalli S; Gosavi S
    Proteins; 2014 Mar; 82(3):364-74. PubMed ID: 23966061
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Probing possible downhill folding: native contact topology likely places a significant constraint on the folding cooperativity of proteins with approximately 40 residues.
    Badasyan A; Liu Z; Chan HS
    J Mol Biol; 2008 Dec; 384(2):512-30. PubMed ID: 18823994
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Folding of Top7 in unbiased all-atom Monte Carlo simulations.
    Mohanty S; Meinke JH; Zimmermann O
    Proteins; 2013 Aug; 81(8):1446-56. PubMed ID: 23553942
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Cooperativity, local-nonlocal coupling, and nonnative interactions: principles of protein folding from coarse-grained models.
    Chan HS; Zhang Z; Wallin S; Liu Z
    Annu Rev Phys Chem; 2011; 62():301-26. PubMed ID: 21453060
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Single molecule force spectroscopy reveals the context dependent folding pathway of the C-terminal fragment of Top7.
    Li J; Chen G; Guo Y; Wang H; Li H
    Chem Sci; 2020 Dec; 12(8):2876-2884. PubMed ID: 34164053
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The highly cooperative folding of small naturally occurring proteins is likely the result of natural selection.
    Watters AL; Deka P; Corrent C; Callender D; Varani G; Sosnick T; Baker D
    Cell; 2007 Feb; 128(3):613-24. PubMed ID: 17289578
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Desolvation barrier effects are a likely contributor to the remarkable diversity in the folding rates of small proteins.
    Ferguson A; Liu Z; Chan HS
    J Mol Biol; 2009 Jun; 389(3):619-36. PubMed ID: 19362564
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Energy Landscape of the Designed Protein Top7.
    Neelamraju S; Gosavi S; Wales DJ
    J Phys Chem B; 2018 Dec; 122(51):12282-12291. PubMed ID: 30495947
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Effects of desolvation barriers and sidechains on local-nonlocal coupling and chevron behaviors in coarse-grained models of protein folding.
    Chen T; Chan HS
    Phys Chem Chem Phys; 2014 Apr; 16(14):6460-79. PubMed ID: 24554086
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Funneling and frustration in the energy landscapes of some designed and simplified proteins.
    Truong HH; Kim BL; Schafer NP; Wolynes PG
    J Chem Phys; 2013 Sep; 139(12):121908. PubMed ID: 24089720
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Folding simulations of a de novo designed protein with a betaalphabeta fold.
    Qi Y; Huang Y; Liang H; Liu Z; Lai L
    Biophys J; 2010 Jan; 98(2):321-9. PubMed ID: 20338854
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Single-molecule force spectroscopy reveals a mechanically stable protein fold and the rational tuning of its mechanical stability.
    Sharma D; Perisic O; Peng Q; Cao Y; Lam C; Lu H; Li H
    Proc Natl Acad Sci U S A; 2007 May; 104(22):9278-83. PubMed ID: 17517616
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Coordinate-Dependent Drift-Diffusion Reveals the Kinetic Intermediate Traps of Top7-Based Proteins.
    Oliveira RJ
    J Phys Chem B; 2022 Dec; 126(51):10854-10869. PubMed ID: 36519977
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Design of a novel globular protein fold with atomic-level accuracy.
    Kuhlman B; Dantas G; Ireton GC; Varani G; Stoddard BL; Baker D
    Science; 2003 Nov; 302(5649):1364-8. PubMed ID: 14631033
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Introduction of a polar core into the de novo designed protein Top7.
    Basanta B; Chan KK; Barth P; King T; Sosnick TR; Hinshaw JR; Liu G; Everett JK; Xiao R; Montelione GT; Baker D
    Protein Sci; 2016 Jul; 25(7):1299-307. PubMed ID: 26873166
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Molecular basis of the structural stability of a Top7-based scaffold at extreme pH and temperature conditions.
    Soares TA; Boschek CB; Apiyo D; Baird C; Straatsma TP
    J Mol Graph Model; 2010 Jun; 28(8):755-65. PubMed ID: 20185346
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Transferable coarse-grained potential for de novo protein folding and design.
    Coluzza I
    PLoS One; 2014; 9(12):e112852. PubMed ID: 25436908
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Solvation effects and driving forces for protein thermodynamic and kinetic cooperativity: how adequate is native-centric topological modeling?
    Kaya H; Chan HS
    J Mol Biol; 2003 Feb; 326(3):911-31. PubMed ID: 12581650
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.